Gene Mchl_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2063 
Symbol 
ID7115847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2161076 
End bp2162488 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content71% 
IMG OID643524813 
Producturate catabolism protein 
Protein accessionYP_002420838 
Protein GI218530022 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0726] Predicted xylanase/chitin deacetylase
[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase
[TIGR03212] putative urate catabolism protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00890496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACACCT CCCGCGACCT GATCGGATAC GGCCGCACCA TTCCGCAGGC GGATTGGCCC 
GGCGGCGCCC GGATCGCCGT GCAGATCGTG CTGAACTACG AGGAGGGGGG CGAGAACTGC
ATCCTGCACG GGGATGCGGC CTCCGAGGCG TTCCTGTCCG AGATCGTCGG CGCGGCGCCC
TGGCCCGGCA TGCGCCACAT GAACATGGAG TCGCTCTACG AGTACGGCGC CCGCGCCGGC
TTCTGGCGGC TGTGGCGGCT GTTCACCGAG CGGGGCGTGC CGGTGACCGT GTTCGGCGTC
GCCACCGCGC TGGCGCGCAA CCCGGAGGTC GTGGCCGCGA TGCGGGAGGC GGATTGGGAG
ATCGCCAGCC ACGGCCTGAA ATGGATCGAT TACCGCGATA TGCCGCGCGC GGAGGAGGCC
GCGCAGATGG ATGCGGCGAT CCGCCTGCAC GAGGAGGTGA CGGGCGAGCG CCCCCTTGGC
TGGTACACCG GCCGCTCCTC CGTCAACACG CTCGAACTCG GCCTGGAACG GGGCTTTGCC
TATCTCGCCG ATTCCTACGC CGACGACCTG CCCTACTGGC TGTACGGGCG GGCCGGCACC
GGCCTCGTGG TGCCCTACAC CCTCGACGCG AACGACATGC GCTTCGCCAC GGCGCAGGGC
TTCAACACCG GCGAGCACTT CTTCACCTAC CTGCGCGACA GCTTCGATGC GCTCTACGCG
GAGGGCGCCG CCGCGCCGAA GATGATGTCA GTGGGCCTGC ACTGCCGTCT GGTCGGCCGG
CCCGGCCGCA TCGCCGCCCT CGCGCGCTTC CTCGACCACG TTGCCGCCCA TGACGGCGTC
TGGCTGGCGC GCCGCATCGA CATCGCCCGG CACTGGACGG CGCGGCACCC GGCCGAAACC
TTGCGCCCGA GCACCATGAG CGCGGCGCAG TTCCTCACCC GGTTCGGCGA CATCTTCGAG
GACACGCCGG AGATCGCGCT CCGGGCGTGG CAGGCCGGCC TCACCGCGCG CGAGGACAGC
GCGGAGGGGC TCCATGCCGC GCTTGTCGGC GCCCTGCGCG GCCTGCCCGC CGAGCAGCAG
CGCGCCCTCA TCCGCGCCCA TCCCGAACTC GCCGGACGGC TCGCCCAGGC GGGACAGTTG
ACGCAAGCCT CCACCACCGA GCAGGGCAGC GCCGGCCTCG GCGCGCTCTC GGCCGAGGAG
TTGGCGCGGT TCGAGCGGCT GAACGCGGCC TACCGCGCGC GCTTCGACCT GCCCTTCATC
ATGGCCATCA AGGGCAGCAG CCGCGAGGCA ATCCTGGCGG CGTTCGAGGC GCGGCTGCGC
AACGATCCCG AGCAGGAGTT TCAGGAGGCT TTGCGCCAAA TCGAGCGGAT CGCGTGGCTG
CGCCTGAAGG ACCGGCTGCC CTCGGAGAGT TGA
 
Protein sequence
MHTSRDLIGY GRTIPQADWP GGARIAVQIV LNYEEGGENC ILHGDAASEA FLSEIVGAAP 
WPGMRHMNME SLYEYGARAG FWRLWRLFTE RGVPVTVFGV ATALARNPEV VAAMREADWE
IASHGLKWID YRDMPRAEEA AQMDAAIRLH EEVTGERPLG WYTGRSSVNT LELGLERGFA
YLADSYADDL PYWLYGRAGT GLVVPYTLDA NDMRFATAQG FNTGEHFFTY LRDSFDALYA
EGAAAPKMMS VGLHCRLVGR PGRIAALARF LDHVAAHDGV WLARRIDIAR HWTARHPAET
LRPSTMSAAQ FLTRFGDIFE DTPEIALRAW QAGLTAREDS AEGLHAALVG ALRGLPAEQQ
RALIRAHPEL AGRLAQAGQL TQASTTEQGS AGLGALSAEE LARFERLNAA YRARFDLPFI
MAIKGSSREA ILAAFEARLR NDPEQEFQEA LRQIERIAWL RLKDRLPSES