Gene Mchl_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2056 
Symbol 
ID7118756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2154414 
End bp2155160 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID643524806 
Productisochorismatase hydrolase 
Protein accessionYP_002420831 
Protein GI218530015 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID[TIGR03614] pyrimidine utilization protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0831182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCG ATGCCCCCGC GGGCTACCGC GATCCGTCCG GCCGTCACGG CGCGGTCACG 
CTGCCGGCGC GGCCCGAGCC GATCGCCTTC GACGCGGACA CGACTGTGCT CATCGTCGTC
GACATGCAGA ACGCCTACGC GACTAAAGGC GGCTATCTCG ATCTCGCCGG CTTCGACGTC
TCGGCGACCG GGCCGGTGAT CGAGCGGATC GCCCAGGCCG TGGCGGCGGC CCGCGCGGCC
GGCATCCGCG TGGTCTGGTT CCAGAACGGC TGGGACCCGG ACTACGTCGA GGCCGGGGGG
CCGGGCTCGC CGAACTGGCA CAAGTCGAAC GCGCTCAAGA CCATGCGGCG CCGGCCGGAG
ATGAACCAGC GGCTCCTGGC CAAGGGCACG TGGGACTACG CCCTCGTCGA TGCGCTGACG
CCCGAGCCCG GCGACATCGT CCTGCCCAAG CCCCGCTACA GCGGCTTCTA CAACACGCCG
CTGGACAGCA TGCTGCGGGC GCGCGGCATC CGCACGCTGG TCTTCACCGG CATCGCCACG
AATGTCTGCG TGGAATCGAC CCTGCGCGAC GGCTACCACC GCGAATATTT CGGGATCGTG
CTCGCCGACG CCACCCATCA GGCCGGCCCG CCCGCCCTGC AGGAGGGCGC GCTGCGCAAC
ATCGAGACCT TCTTCGGCTG GGTGTCGGAT GTCGCCGCCT TCGAGGCCGC GCTCAGCTCC
GACGAAGCCC GCCGCATCCC CGCCTGA
 
Protein sequence
MEADAPAGYR DPSGRHGAVT LPARPEPIAF DADTTVLIVV DMQNAYATKG GYLDLAGFDV 
SATGPVIERI AQAVAAARAA GIRVVWFQNG WDPDYVEAGG PGSPNWHKSN ALKTMRRRPE
MNQRLLAKGT WDYALVDALT PEPGDIVLPK PRYSGFYNTP LDSMLRARGI RTLVFTGIAT
NVCVESTLRD GYHREYFGIV LADATHQAGP PALQEGALRN IETFFGWVSD VAAFEAALSS
DEARRIPA