| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2042 |
|---|
| Symbol | |
|---|
| ID | 7118742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2139760 |
|---|
| End bp | 2141127 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 643524792 |
|---|
| Product | cytosine deaminase-like protein |
|---|
| Protein accession | YP_002420817 |
|---|
| Protein GI | 218530001 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.670818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGC CGCCGTTCCT GCCCGAGGCC CACGCCTACC GCCTGCGCGA CGCGCGCGTG
CCCGGAGCTT TCCTGACGGG CGGCGTGCCG GCCGGCGCGA CACTCGACGG GGACGGCTGC
GCGCTCCTCG ACATCGTCGT CGCGGACGGC GTCGTCGCCC GTCTCCTGCC GGCCGGGGGG
ACGCCGGATA CGCTGCCCGC CGCCGATCTC GCCGGGCGGC AGGTCTGGCC CCGCCTCGTC
GATGCGCATA CCCACCTCGA CAAGGGCCAC ACCGTCGCTC GCACGCCCAA TCCGGCCGGC
GACTTTCCCG GCGCCCGCGA CGCCACCACG GCGGACCGTA CCCGCCACTG GGACGCGGAG
GATCTGCGCC GCCGCATGAC CTTCGGCCTC GCCTGCGCCT TCGCGCACGG CACGGGCGCG
ATCCGCACGC ATCTCGACAG TCAGGAGAGC GGGGAGGGCG CGCCGCGCGA CCAGGCCGCG
ACGACCTGGG CGGTGTTCCG GGAGATGCGG GCGGCCTGGG CCGGGCGGAT CGCGCTGCAG
GGCGTCGGCC TGACCCCGAT CGACGCCTAC GCCACCGATT ACGGGCGCCG CCTCGCCGAC
CTGATCGCCG ATTCGGACGG GCTGATCGGC GGCGTGACCC GGCCGACCGG CGGCCTGCAT
GGCGGGGCGC TGGCCGAGAT CGACGCCCTG CTCGACCGCC TGTTCGGCCT CGCCCGCGCC
CGCAACCTCG ATGTGGACCT CCATGTCGAC GAGACCGGCG ATCCCGCGGC GGCCTCCCTC
GACGCGGTCG CGCGGGCGAC CCTGCGCCAC GGCTACGAGG GCCGCGTCAC CTGCGGGCAT
TGCTGCAGCC TCGCGCTCCA GCCCGAGGCG CAGGCTTCGG CCACGATCGC GCGGGTCGCG
CAGGCGGGAA TCCGCATCGT GACGCTGCCG ACCGTCAACA TGTACCTCCA GGACCGGCAG
CGGGGGCGCA CTCCGCGCTG GCGCGGCGTC GCCCCAGTTC AGGAACTGAT GGCAGCCGGC
GTGCCCGTGA TGGTCGCGGG CGACAATTGC CGCGACGCGT TCTACGCCTA CGGCGACCAC
GACATGCTCG ACACATTCCG GGCGTCGGTG CGGATCCTCC ATCTCGATCA TCCACTGGCC
GGCGCGCCCG CGCTCGCCGG GCCGGTGCCG GGGGCGATGA TGGGGCTCCC CCATGCCGGC
ACGATCCGCG AGGGCGCCCC CGCCGACCTG ATGCTTCTGG CCGCGCGCAG CCTCAACGAG
GTCGTCGCGC GGCCGCATGC GGACCGAATC ATCGTGGTCG CGGGCAGGCC CGTCGCGACG
CGGCTGCCGC CCTACGAGGC CCTGACCGGC GAGGCCGCCC CCTGGTAG
|
|---|
| Protein sequence | MSEPPFLPEA HAYRLRDARV PGAFLTGGVP AGATLDGDGC ALLDIVVADG VVARLLPAGG
TPDTLPAADL AGRQVWPRLV DAHTHLDKGH TVARTPNPAG DFPGARDATT ADRTRHWDAE
DLRRRMTFGL ACAFAHGTGA IRTHLDSQES GEGAPRDQAA TTWAVFREMR AAWAGRIALQ
GVGLTPIDAY ATDYGRRLAD LIADSDGLIG GVTRPTGGLH GGALAEIDAL LDRLFGLARA
RNLDVDLHVD ETGDPAAASL DAVARATLRH GYEGRVTCGH CCSLALQPEA QASATIARVA
QAGIRIVTLP TVNMYLQDRQ RGRTPRWRGV APVQELMAAG VPVMVAGDNC RDAFYAYGDH
DMLDTFRASV RILHLDHPLA GAPALAGPVP GAMMGLPHAG TIREGAPADL MLLAARSLNE
VVARPHADRI IVVAGRPVAT RLPPYEALTG EAAPW
|
|---|
| |