Gene Mchl_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2020 
Symbol 
ID7118720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2116662 
End bp2117768 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID643524770 
Productbasic membrane lipoprotein 
Protein accessionYP_002420795 
Protein GI218529979 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.137237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCCC ATCCTTTCTC CCGCAGACAT CTTCTCGGCG GTGCGGCCGC CCTCTCGCTC 
GGCGCGCTGC CCTTCGGCCG CGCCCGGGCC GCCGGCCCGC TCACCGTCGG GTTCATCTAT
GTCGGGCCGA AGGACGATTA CGGCTACAAC CAAGCCCACG CCCAAGGTGC GGCCGCCCTC
AAGGCGATCC CCGGCCTTCA GGTCGTCGAG GAGGAGAACG TCCGCGAGAC CACCGACGTC
CAGAAGACCA TGGAGAGCAT GATCAACCTG GACGGCGCGA GCCTCGTCTT CCCGACGTCC
TTTGGCTACT TCGATCCGCA CGTGCTGATC GAGGCCAAGA AGAACCCGAA GGTACAGTTC
CGCCATTGCG GCGGCCTCTG GACCGAGGCG AACCCGAAGA ACGCCGGCTC GTATTTCGGC
TACATCGCCC AAGGCCAGTA CCTGAACGGC ATCGTCGCCG CCCACGCCTC GAAGTCGAAG
CGGCTCGGCT TCGTCGCCGC CAAGCCGGTC CCCCAGGTGC TCAACAACGT CAACGGCTTC
CTGCTCGGCG CGCGCAGCGT CGACCCGTCC ATCACCCTGC AGGTGATCTT CACCGGTGAG
TGGTCGCTCG CGGTCAAGGA GGCGGAGGCG ACCAACGCGC TGATCGACGG CGGGGCCGAC
GTGATCACCT GCCACGTCGA TGGTCCCAAG GTCGTGGTCG AGACCGCCGC GCGGCGCGGG
GCCTTCGTCT GCGGCTACCA CGCCGACCAG TCGGCACTCG CCAAGGACAA GTACCTCACC
GGCGCCGAGT GGAACTGGGC CTCGATCTAC AAGGGCTTCG TCGCCGACAT GCAGGCGGGC
AAGGCGCCCC CGAACTTCGT GCGCGGCGGC CTGCCGGACG GATTCGTGAA GATGAGCCCC
TACGGGCCCG CGGTGTCCGA GGAGGCGCGC CGCAACGCCG ACGCGGTCAA GGCCGAGATG
ATGAAGGGCG GCTTCGCCAT CATCAAGGGC CCGCTCAAGG ACAACAAGGG CAACGAGATC
GCCGGCCCCG GCAAGGCGTT CGCCGAGAAC GCGATCGAGC TGGAGAAGAC CAACTACCTC
GTCGAGGGTG TGAAGGGCTC GGCCTGA
 
Protein sequence
MSAHPFSRRH LLGGAAALSL GALPFGRARA AGPLTVGFIY VGPKDDYGYN QAHAQGAAAL 
KAIPGLQVVE EENVRETTDV QKTMESMINL DGASLVFPTS FGYFDPHVLI EAKKNPKVQF
RHCGGLWTEA NPKNAGSYFG YIAQGQYLNG IVAAHASKSK RLGFVAAKPV PQVLNNVNGF
LLGARSVDPS ITLQVIFTGE WSLAVKEAEA TNALIDGGAD VITCHVDGPK VVVETAARRG
AFVCGYHADQ SALAKDKYLT GAEWNWASIY KGFVADMQAG KAPPNFVRGG LPDGFVKMSP
YGPAVSEEAR RNADAVKAEM MKGGFAIIKG PLKDNKGNEI AGPGKAFAEN AIELEKTNYL
VEGVKGSA