Gene Mchl_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2018 
Symbol 
ID7118718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2114449 
End bp2115540 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID643524768 
Productinner-membrane translocator 
Protein accessionYP_002420793 
Protein GI218529977 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.345381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTG ATCTCCTCCC CCGCGCGCGC CGGTCGCCCT GGCTCGACCT GCTCGCGCCC 
GCGCTCGCCT TCCTGGCCGC GGTCCTGATC GGCGGGATCG CGGTGGCGGC CCTCGGCGTG
GCGCCGGAAC AGGCCTTCCT CACCTATTTC GTCGCGCCCT TGAGCGAGGT CTGGTCGCTG
CAGGAGGTCG CGCTGAAGGC CGCGCCGCTC GCCCTGATCG CGACCGGTCT CGCCTTCTGC
TACCGCGCCA ATCTGTGGAA CATCGGGGCG GAGGGCCAGT ACGTGGCCGG CGGCCTCGCG
GGCGGCTGGG TCGCGGTTGC CGCGCACGGT TTCCAGGGGC CCACCTTCTG GATCCTGCCC
GCGATGCTGC TCGCCGGCAC GCTCGCCGGC ATCGCCTACG CGATGATCCC GGCGCTGCTG
CGGGTCAGGC TCGGTGTCTC GGAGATCCTG ACCAGCCTGA TGCTCGTCTA CGTCGCGCAA
TTGCTGCTCG ATTACATGGT GCGCGGCCCC TTGCGCGATC CGCAGGGCTA CAACTTCCCG
CAGAGCGTCG GCTTCGAGGA CGCCGCCCGG CTGCCGCTGC TGATGGAGGG CGAGTCGCTC
CATGCGGGCG TGCTCATCAG CCTTCTGGGA ATCGTGCTCG CGGCCCTCGT CCTGGCACGC
ACCCTGTTCG GCTTCGAGGT GCGCGCCGTC GGGGCGAGCC CGCGGGCAGC CCGCTTTGCC
GGCTTCTCGG ACGCGCGGCT GACGCTCTCG GTCTTCGCGA TCTCCGGCGG CGCGGCGGGT
CTTGCCGGCA TCTGCGAGGT GGCCGGGCGG ATCGGCCAGC TCCAGCCGGA GATCTCTCCC
GGTTACGGCT TCACCGCGAT CATCGTCGCC TTCCTCGGGC GCCTCAGCCC GCCCGGCATC
CTGCTTGCGG CGCTCGTCAT CGCGCTCACG ACGATCGGCG GGGAGGGGGC TCAGATCGAC
CTGAAGCTGC CGCTCGACCT GACCCGCGCC TTCCAAGGGC TGCTGCTCGG CCTCGTGCTC
GGGGCCGACG TGCTCACGCG CTACCACGTT CGGATCGTGC CGGGCGGCGC GAGCACACGG
GTGACCCCAT GA
 
Protein sequence
MRLDLLPRAR RSPWLDLLAP ALAFLAAVLI GGIAVAALGV APEQAFLTYF VAPLSEVWSL 
QEVALKAAPL ALIATGLAFC YRANLWNIGA EGQYVAGGLA GGWVAVAAHG FQGPTFWILP
AMLLAGTLAG IAYAMIPALL RVRLGVSEIL TSLMLVYVAQ LLLDYMVRGP LRDPQGYNFP
QSVGFEDAAR LPLLMEGESL HAGVLISLLG IVLAALVLAR TLFGFEVRAV GASPRAARFA
GFSDARLTLS VFAISGGAAG LAGICEVAGR IGQLQPEISP GYGFTAIIVA FLGRLSPPGI
LLAALVIALT TIGGEGAQID LKLPLDLTRA FQGLLLGLVL GADVLTRYHV RIVPGGASTR
VTP