| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2008 |
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| Symbol | |
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| ID | 7118708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2096733 |
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| End bp | 2098457 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643524758 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002420783 |
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| Protein GI | 218529967 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG TTGCGATGGA ACTCGGGGCG GTCGATCAAC GTCAAGCCAG CGGTCCAGGA
AAGCGTCGCC TGAGCGTTCA GATTGGCTTG GTATCGCTGA TGGTGACCAC GGCCCTGTCG
GGGTTCTTCT TCACTAACGC GCATCAGCAG GCACTGATCG ATCTCCGTGA GGGCGGACGT
CAGATGCGTA TCGCGCAGGA AGCGCTGATG GACGCGGAGT CCTATGTCCT GAACAAGGCA
CTGGGGACGG GCGATGGTCA GTTCGGAGCA TTCAACCGCG CACTCGAGGC GCTGCACAGC
CGGCGCACCG CGCAGCTCGC CCTGCTGACC CCCTTCATTG GGAGATCGGA CGGCAATGCT
ACGGCGGGAG GCATTCTCGA ATCGCTTGAG GCGAGTTGGA CCGAGGTGCT CGAGCTCGCG
CGGTCCGGAC GTCTCACCGA GGCGCAGGCG CTACTCAGGG AGCGCCATAG TGCTGCTCAG
GTCGGTAGGA TTCGAAGTGC CTTCGACGCG TTCCTGACCG ACTGGAACGC GCACTTCGCT
GTGCACGAGA CCCGCATCGA GATCGGCAAG CTTTTCGTTC TGCTCTCGCA ACTCCTGATT
GGCGGAGTGA TGGTTTTCGC CTTCCGGTCT GCGGCACGCG ATGCTCAAGC GCGGCAGGCC
GCCATTACGC AGGTGGAGGC CTCTCGTAAA CAGGTCGGTC ATTTGTTCGG GATGACCGAC
ATGCTGCAGA GCGCAGCGGA TCACCACGAC GCTAACGCGG TTCTGAGAGC CACCGCCGGA
GAACTCATCG CTGGCTTCGG TGGTGCCCTT TACGTCTTCA ACAACTCGCG TGATCGTCTG
GTGCTCTCCA CCTCTTGGGC ATGCAGTGAC AGTGCTTCCC TCCCGGAGGC CATCATGGTC
GGCCAGTGCT GGGCGATGAA GCGCGGCAAG CCGCACATCA ACCATCGAGG GGCGAAAGCT
CTCTGCTGCG AGCACCATGT CTCTGGCATG GCGGCCTTGG AGATCCCGAT GGCGGCGCGC
GGCGAAAACC TCGGACTCCT GCAGATCTTC GCGGAGGGGG CCGACGCGGA GACACGCCTG
GCTGCGATGC TGCCGCTCAG CTCCGCGCTC GGCGATGCGA TGTCACTTGC GCTCTCAAAC
ATCGCTCTTC GTGAGAAGCT GCGCAACCAA GCCCTTCGCG ATCCACTGAC TGGGCTCTAC
AATCGTCGTT ACATGGAGGA CAGTCTTGAA CGTTACGTTC GGCTCGCCGA ACGGGAAGGT
CGGAAGGTTT CCGTCATCAT GATCGATCTC GACCACTTCA AACGACTGAA CGACGAGCAC
GGTCATGCGA CTGGCGACGC GGTCCTGTGC GAAGCCGCCG CCGCCATCGT GGGCGCCTTG
CGGGAGACAG ATGTGGCCTG CCGGTATGGC GGCGAGGAGA TGATCGTGTT CCTGCCCGAT
TGCGATCTCG AGGACGCGGC AGCCAAGGCC GAGCAGATCC GAGGCCGTAT CGAGAGCCTA
TCCGGCACGC ATGGTGCAAA GGTCTCTGCC TCACTCGGTG TCGCCTCCGT CCCGAGCACC
TCGGGCACCA GTGCCGAACT GATACGCGCT GCGGATACGG CACTTTACCG GGCCAAGCAC
AACGGCCGGA ACCAAGTGGC CGTGGCGCCG CTGCGTCAAG GATGGCGGAG CCGATCCGAG
GCCGCGCCGG ATGAGCCTGT GCTGCTGCCG ATCGCGGCAG AGTAG
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| Protein sequence | MSLVAMELGA VDQRQASGPG KRRLSVQIGL VSLMVTTALS GFFFTNAHQQ ALIDLREGGR
QMRIAQEALM DAESYVLNKA LGTGDGQFGA FNRALEALHS RRTAQLALLT PFIGRSDGNA
TAGGILESLE ASWTEVLELA RSGRLTEAQA LLRERHSAAQ VGRIRSAFDA FLTDWNAHFA
VHETRIEIGK LFVLLSQLLI GGVMVFAFRS AARDAQARQA AITQVEASRK QVGHLFGMTD
MLQSAADHHD ANAVLRATAG ELIAGFGGAL YVFNNSRDRL VLSTSWACSD SASLPEAIMV
GQCWAMKRGK PHINHRGAKA LCCEHHVSGM AALEIPMAAR GENLGLLQIF AEGADAETRL
AAMLPLSSAL GDAMSLALSN IALREKLRNQ ALRDPLTGLY NRRYMEDSLE RYVRLAEREG
RKVSVIMIDL DHFKRLNDEH GHATGDAVLC EAAAAIVGAL RETDVACRYG GEEMIVFLPD
CDLEDAAAKA EQIRGRIESL SGTHGAKVSA SLGVASVPST SGTSAELIRA ADTALYRAKH
NGRNQVAVAP LRQGWRSRSE AAPDEPVLLP IAAE
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