Gene Mchl_1989 details

Gene Information

• Locus tag: Mchl_1989
• ID: 7118689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium chloromethanicum CM4
• Kingdom: Bacteria
• Replicon accession: NC_011757
• Strand: +
• Start bp: 2073066
• End bp: 2078879
• Gene Length: 5814 bp
• Protein Length: 1937 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643524741
• Product: GAF sensor hybrid histidine kinase
• Protein accession: YP_002420766
• Protein GI: 218529950
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGCCGA CTACGTTGCA GTTGGAGCCG AAGCTCCTCC TGAAGAGCCT TCGTGCCTTT 
CGGAAGGGGG ACTTCTCGAC TCGGCTGCCG CTGGATCTGA CGGGCATTGA GGGGGAGATC 
GCGCAAGCGT TCAACGATAT CATCGAGCTC AACCAAGGGC TCGCCCGTGA ACTCGACAGG 
GTCGCCCGCG CGGTCGGCAA GGACGGGCGC ATCGGCGAGC GCGGAAAGCT TCCGGCCGCG 
ACCGGCGGGT GGAACGATTG CGTCGAGTCG GTCAACACGA TGATCGGCGA CCTTGTTCAG 
CCCACCACCG AGGTGGCGCG CGTCATCGGG GCCGTCGCCA AGGGCGACCT CGGCCAGACC 
ATGCAGATCG AGATCGAGGG CCGGCCCCTG CGCGGCGAGT TCCTTCGGAT CGGCAAGGTC 
GTCAACACGA TGGTGGACCA GCTGAACTCC TTCGCCTCCG AGGTGACCCG CGTCGCCCGC 
GAGGTCGGCT CGGAGGGCAA GCTCGGAGGG CAGGCGCAGG TCAAGGGCGT CGGCGGGACC 
TGGAAGGACC TGACCGACAA CGTGAACCTG ATGGCGGCGA ACCTGACGGG CCAAGTGCGC 
AACATCGCCG AAGTCACCAC CGCGGTGGCC AACGGCGACT TGTCCAAGAA GATCACCGTC 
GACGTGAAGG GCGAGATCCT CGACCTGAAA TCGACCATCA ACACGATGGT GGACCAGCTC 
AATTCCTTCG CCTCAGAAGT GACCCGCGTC GCCAAGGAGG TGGGGTCGGA GGGCAAGCTC 
GGCGGACAGG CGCAGGTCAA GGGCGTCGGC GGCGTCTGGA AGGACCTGAC CGACAACGTG 
AACATGATGG CGGAAAACCT GACGGGCCAG GTGCGCAACA TCGCCGAGGT CACGACCGCG 
GTCGCGCGGG GCGACCTGTC CAAGAAGATT ACCGTCGATG TGAAGGGCGA GATTCTCGCC 
TTGAAGCTGA CCATCAACAC GATGGTGGAC CAGCTGAACT CCTTCGCCTC CGAGGTGACC 
CGCGTCGCCC GCGAGGTCGG CACGGAGGGC AAGCTCGGCG GACAGGCGCA GGTCGAGGGC 
GTGGGCGGGA CCTGGAAGGA CCTGACCGAC AACGTGAACA TGATGGCGGC CAACCTGACG 
GGGCAGGTGC GCAACATCGC CGAAGTCACC ACCGCGGTGG CCAACGGCGA TCTGTCCAAG 
AAGATCACCG TCGATGTGCG CGGCGAGATC CTGGAACTCA AGAACACCAT CAACACGATG 
GTGGACCAAC TGAACTCCTT CGCCTCGGAG GTGACCCGCG TCGCCCGCGA GGTCGGCTCG 
GAAGGCAAGC TCGGCGGGCA GGCGCAGGTG CGCGGTGTCG CCGGAACCTG GGCCGACCTC 
ACCGACAACG TGAACCTGAT GGCGGCCAAC CTCACTGGGC AGGTGCGCAA CATCGCCGAC 
GTGACGACGG CGGTGGCCAA CGGCGATCTG TCCAAGAAGA TCACTGTCGA CGTGCGCGGC 
GAGATCCTGG AACTCAAGAA CACCATCAAC ACGATGGTGG ACCAACTGAA CTCCTTCGCC 
TCGGAGGTGA CCCGCGTCGC GAAGGAAGTG GGTTCGGAAG GCAAGCTTGG CGGTCAGGCC 
CGCGTCGAGG GCGTGGCCGG CACATGGGCC GACCTCACCG ACAACGTGAA CCTGATGGCG 
GCCAACCTGA CAGGCCAGGT GCGTAACATC GCCGATGTGA CGACCGCGGT CGCCAATGGC 
GATCTGTCCA AGAAAATCAC CGTCGATGTG AAGGGCGAGA TCCTGGAGCT CAAATCGACC 
ATCAACACGA TGGTGGATCA GCTGAACTCC TTCGCCTCGG AGGTGACCCG CGTCGCCCGC 
GAGGTCGGCA CGGAGGGCAA GCTCGGCGGA CAGGCGCAGG TCAAAGGCGT CGGCGGCGTC 
TGGAAGGGCC TGACCGACAA CGTGAACATG ATGGCGGCCA ACCTGACGGG CCAAGTGCGC 
AACATCGCCG AGGTGACGAC CGCGGTCGCC AACGGCGACC TGTCCAAGAA GATCACGGTG 
GCCGTCGAGG GCGAGATCCT GGAGCTCAAA TCGACCATCA ACACGATGGT GGATCAGCTG 
AACTCATTCG CCTCGGAGGT GGTCCGCGTC GCCCGCGAGG TCGGCATCGA GGGCAAGCTC 
GGTGGCCAGG CACAGGTGCG CGGCGTCGGC GGGACTTGGA AGGACCTGAC CGATAACGTG 
AACATGATGG CGGCCAACCT CACGGGGCAG GTGCGCAACA TCGCCGACGT GACGACGGCG 
GTCGCCAATG GCGATCTGTC CAAGAAGATC ACGGTCGACG TGAAGGGCGA GATCCTGGAG 
CTCAAATCGA CCATCAACAC GATGGTGGAT CAGCTGAACT CCTTTGCCTC GGAGGTGACC 
CGCGTTGCCC GCGAGGTCGG CTCCGAGGGC AAACTCGGCG GCCAGGCACA GGTGCGCGGC 
GTCGGCGGGA CCTGGAAGGA CCTGACCGAC AACGTGAACA TGATGGCGGC CAACCTCACC 
GGTCAGGTGC GCGGCATCGC AGACGTCGTC ACGGCGGTGG CACAGGGCGA CCTCAAGCGG 
AAACTCTCGG TCGACGCCAA GGGCGAGATC GCGGCGCTGG CCGACACCGT CAACGAGATG 
ATCGAGACGC TCGCCACCTT TGCCGACCAG GTGACCAACG TGGCGCGCGA GGTGGGCGTC 
GAAGGCAAGC TGGGCGGCCA GGCACGGGTG CCGGGCGCGG CGGGTCTCTG GCGTGATCTG 
ACGGACAACG TGAACCAGCT CGCGGCGAAC CTCACGACCC AGGTGCGCGC CATCGCCGAG 
GTGGCGACCG CCGTGACGAA GGGGGATCTC GCGCGCTCGA TCTCGGTCGA GGCCTCCGGC 
GAGGTCGCCT CGCTGAAGGA CAACATCAAC GAGATGATCC GCAATCTGCG GGACACGACG 
CTCAAGAACG CCGAGCAGGA TTGGCTGAAG ACCAACCTCG CCAAGTTCAC CCGCATGCTG 
CAGGGCGAGC GCGACCTCGC CACGGTCTCG AACCTGATCC TGTCCGAGAT TGCATCGCTC 
GTGAGCGCCC AGCGCGGCGT GTTCTACATG GTGGAGGACG AGGGTGGGGA GCCGGTTCTC 
GATCTGATGG CGAGCTACGC CTTCACGGAG CGCAAGAACC TCTCGAACCG CTATCGCCTG 
CGTCAAGGCC TCGTCGGCCA ATGCGCCTTC GAGAAGAAGC GCATCCTCCT CACCCACGTG 
CCCGGCGACT ACATCACCAT CGGCTCGGCT CTCGGCGAGG CGCCGCCCCT CAACATCATC 
GTGCTGCCCG TCCTCTTCGA GCAGGAAGTC CGAGCGGTCA TCGAGCTGGC GTCGTTCAAC 
CGCTTCAGCG AGACCCACCA GTCCTTCCTC GATCAGCTGA CCGAGTCGAT CGGGATCGTG 
CTCAACACGA TCGCTGCCAA CATGAGGACG GAAGGCCTCC TGAAGCAATC GCAGCTCCTG 
ACCGGCGAGT TGCAGAGCCG GCAGGAAGAA TTGAAGAAGA CGAACGATCG CCTGGAGCTG 
CAGGCCGCCT CGCTGCAGCA ATCCGAGGAC CTCCTGAAGA ACCAGCGGGA GCGGCTGCAG 
CAGACCAACG AGGAGCTGGA GGAAAAGGCG CGCCTGCTCG AAATCCAGAA GCGTGAGGTC 
GAGGGCAAGA ACCGCGAGGT CTCGATCGCC AAGACGGCGC TGGAGGAGAA GGCCGAGCAG 
CTGAGCCTGA CCTCGCGCTA CAAGTCGCAA TTCCTCGCCA ATATGAGCCA CGAGCTGCGC 
ACGCCGCTCA ACAGCCTGCT GATCCTCTCG AAGCTTCTCT CCGAGAACCG CGACGGGAAC 
CTCACCGACA AACAGCGGGA ATTCGCCAAG ACGATCAACG CGGCCGGGAC CGACCTCCTG 
TCACTCATCA ACGACATCCT CGATCTCTCC AAGATCGAGT CGGGCACGGT GTCGCTCGAG 
ATCGGCGACG TTACGCTGCA GGACATCAGC GAGAACCTGA ACAGGACCTT CCGGCAGCTC 
GCCGAGGAGC GCCACCTCGC CTTTGTGATC GAGGTCGATC CGGGCCTGCC GCGCTCCCTG 
CGGACGGACT CGAAGCGCCT GCAGCAGGTC CTGCGCAACC TTCTCTCCAA CGCCTTCAAG 
TTCACCGAGA AGGGGAGCGT CTCGCTCAAG ATCGGTTCCG CGGAGGGCTC GCCCCTGCGC 
GCCGGGACCC AGTGGATCGC CATGTCCGTC ACCGATACCG GGATCGGCAT CGCCGAGGAC 
AAGCAGCGGA TCATCTTCGA GGCGTTCCAG CAGGCCGACG GGACGACGAG CCGCAAGTAC 
GGCGGCACGG GCCTCGGCCT CGCGATCAGC CGCGAGATCG CGCGCCTGCT GGGCGGCGAG 
ATCGTGGTCG AGAGCCGCGT CGGTACGGGC AGCACCTTCA CCCTGTTCCT GCCCTTCGAG 
CCGCCCGCGC AGGCGCTCAC CGGACGCGCG GCGGAGGCAT CGGACGGGTA CGCGCCTTCG 
GCGCCGATGG GCCGCCAGCC GAACACCGCG ATGGCGCTCT CGTCCTCCGC GGACGACCGC 
CACGCGATTC ACCCGAGCGA CCACATCGTG CTCATCGTGG AGGACGACGC CATGTTCGCC 
TCGGTGCTGC TGGAGCTCGC GCGTGAGCGT GGCTTCAAAG GTTTGATCGC GCAGGACGGG 
GCCGGCGCGC TTAGCCTCGC GCACCGCTTC AAGCCGCACG CCATCACCCT CGACATCGGC 
CTGCCCGACA TGGACGGCTG GGCCCTGCTC GACCTCCTGA AGAACGATCC CCGCACCCGG 
CACATTCCGA TCCACGTGAT CTCGGTCAAC GACGAGAAGA AGCGCGGCCT TCGCGCGGGC 
GCGTTCGGGT TTCTGGAGAA GCCGGTCGAG CGCGAGGGCC TGATGCGCGC CCTGGAACGC 
TCGAAGGAGT TCATCACGCG GCCGGTGCGC AACCTCCTGC TCGTCGAGGA CGACGAGAAC 
CAGCGCGCCA GCATCACAGC GCTCCTGAGC GAAGAGGACG TCAAGATCTT CGGAGTCGGC 
ACGGCCTCCG CCGCGCTGGA AGCCCTGACA GGCGGCCGGT TCGACTGCGC GATCATCGAT 
CTCGGCCTGC CCGATATCGG CGGTTCCGAG CTGATCGAGC AGATCCGTGC CTCCCAGGAC 
GGGGAGGAGT TGCCGATCAT CGTGTATACG GGCCGGGAGC TGACGGCCGC CGAGGAGCAG 
CAGCTCAGGC ACACCGCCTC GACGATCATC CTCAAGGACA CGCGCTCGTC CGAGCGACTT 
CTCGACGAGA CCGCGCTGTT CCTGCATCGC GCGATCAATC GCGTTCCAGT CGAGGAGCAG 
ATCCTCGTCG AGCGGAAGGA TGCGGCGTCA CTTCAGGGCT GCCGGGTCAT CCTGGTCGAT 
GACGACCTGC GCAACATCTT CTCGCTCACG AGTGCCCTCG AGCAGCACGG GCTGGAAGTC 
CTGTTCGCCG AGAACGGGCA GGACAGCATC GCCCTCCTCA AGTCCAACCC GAACATCGAT 
GCGATGCTGG TCGACATCAT GATGCCGGGG ATGGACGGCT ACGAGACGAT GCGCGCGATC 
CGGGCGGAGG CCAGCTTCCG TAGCCTGCCG CTCATCGCGG TGACCGCGAA GGCCATGAAG 
GGCGACCGCG AGAAGTGCCT CGAGGCGGGC GCATCCGATT ACGTCTCGAA GCCGATCGAC 
ATGGATCAAC TCCTCGCGGT GCTGCGGGTG CAGTTGGCCC GGCGTGGCGA GGTTGCACAC 
GGCCCCTTGC TCACGCTCGG CGACCCGACG GCCCTCGATC GGCAACAACA ATGA 

 

Protein sequence

MTPTTLQLEP KLLLKSLRAF RKGDFSTRLP LDLTGIEGEI AQAFNDIIEL NQGLARELDR 
VARAVGKDGR IGERGKLPAA TGGWNDCVES VNTMIGDLVQ PTTEVARVIG AVAKGDLGQT 
MQIEIEGRPL RGEFLRIGKV VNTMVDQLNS FASEVTRVAR EVGSEGKLGG QAQVKGVGGT 
WKDLTDNVNL MAANLTGQVR NIAEVTTAVA NGDLSKKITV DVKGEILDLK STINTMVDQL 
NSFASEVTRV AKEVGSEGKL GGQAQVKGVG GVWKDLTDNV NMMAENLTGQ VRNIAEVTTA 
VARGDLSKKI TVDVKGEILA LKLTINTMVD QLNSFASEVT RVAREVGTEG KLGGQAQVEG 
VGGTWKDLTD NVNMMAANLT GQVRNIAEVT TAVANGDLSK KITVDVRGEI LELKNTINTM 
VDQLNSFASE VTRVAREVGS EGKLGGQAQV RGVAGTWADL TDNVNLMAAN LTGQVRNIAD 
VTTAVANGDL SKKITVDVRG EILELKNTIN TMVDQLNSFA SEVTRVAKEV GSEGKLGGQA 
RVEGVAGTWA DLTDNVNLMA ANLTGQVRNI ADVTTAVANG DLSKKITVDV KGEILELKST 
INTMVDQLNS FASEVTRVAR EVGTEGKLGG QAQVKGVGGV WKGLTDNVNM MAANLTGQVR 
NIAEVTTAVA NGDLSKKITV AVEGEILELK STINTMVDQL NSFASEVVRV AREVGIEGKL 
GGQAQVRGVG GTWKDLTDNV NMMAANLTGQ VRNIADVTTA VANGDLSKKI TVDVKGEILE 
LKSTINTMVD QLNSFASEVT RVAREVGSEG KLGGQAQVRG VGGTWKDLTD NVNMMAANLT 
GQVRGIADVV TAVAQGDLKR KLSVDAKGEI AALADTVNEM IETLATFADQ VTNVAREVGV 
EGKLGGQARV PGAAGLWRDL TDNVNQLAAN LTTQVRAIAE VATAVTKGDL ARSISVEASG 
EVASLKDNIN EMIRNLRDTT LKNAEQDWLK TNLAKFTRML QGERDLATVS NLILSEIASL 
VSAQRGVFYM VEDEGGEPVL DLMASYAFTE RKNLSNRYRL RQGLVGQCAF EKKRILLTHV 
PGDYITIGSA LGEAPPLNII VLPVLFEQEV RAVIELASFN RFSETHQSFL DQLTESIGIV 
LNTIAANMRT EGLLKQSQLL TGELQSRQEE LKKTNDRLEL QAASLQQSED LLKNQRERLQ 
QTNEELEEKA RLLEIQKREV EGKNREVSIA KTALEEKAEQ LSLTSRYKSQ FLANMSHELR 
TPLNSLLILS KLLSENRDGN LTDKQREFAK TINAAGTDLL SLINDILDLS KIESGTVSLE 
IGDVTLQDIS ENLNRTFRQL AEERHLAFVI EVDPGLPRSL RTDSKRLQQV LRNLLSNAFK 
FTEKGSVSLK IGSAEGSPLR AGTQWIAMSV TDTGIGIAED KQRIIFEAFQ QADGTTSRKY 
GGTGLGLAIS REIARLLGGE IVVESRVGTG STFTLFLPFE PPAQALTGRA AEASDGYAPS 
APMGRQPNTA MALSSSADDR HAIHPSDHIV LIVEDDAMFA SVLLELARER GFKGLIAQDG 
AGALSLAHRF KPHAITLDIG LPDMDGWALL DLLKNDPRTR HIPIHVISVN DEKKRGLRAG 
AFGFLEKPVE REGLMRALER SKEFITRPVR NLLLVEDDEN QRASITALLS EEDVKIFGVG 
TASAALEALT GGRFDCAIID LGLPDIGGSE LIEQIRASQD GEELPIIVYT GRELTAAEEQ 
QLRHTASTII LKDTRSSERL LDETALFLHR AINRVPVEEQ ILVERKDAAS LQGCRVILVD 
DDLRNIFSLT SALEQHGLEV LFAENGQDSI ALLKSNPNID AMLVDIMMPG MDGYETMRAI 
RAEASFRSLP LIAVTAKAMK GDREKCLEAG ASDYVSKPID MDQLLAVLRV QLARRGEVAH 
GPLLTLGDPT ALDRQQQ