| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1972 |
|---|
| Symbol | |
|---|
| ID | 7116788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2044658 |
|---|
| End bp | 2045320 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643524725 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase family 2 |
|---|
| Protein accession | YP_002420751 |
|---|
| Protein GI | 218529935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.289767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGTT CAACTGTGGA GTCTTACAAT GAAGTTCATT ATCACAAAGA CATTATCCGC
TACCGATGCA TGATAATTTT ATTTGCTGTT ACTTTTTCGT CGACGGCTTG TGCCGAAGAA
GGCGTGCAAA TAATATCGCG CGAGAGTTGG GGTGCAAACC CAGCCACAAA ACCCATGGCA
GATAACAAGC CCGTCCACCT TACAATCCAT CATACAGGTG TTCGAGCAAA AGCTAGCATA
AATTTACAAG CAAAACTGAC TAGTCTTCAG AAATTTTCGC AATCTAGCGC GGTGTTGGCC
GATGGCCGCG TAAAGTCCGC ATGGGCTGAT GTGCCTTACC ACTATTATAT TGCTGTCGAT
GGCCTAATTG CGGAAGGCCG AATGGCTAAA TATGTAGGGG ACAGCAATAC AATTTACAAT
CTCCAAGGAC ATCTCAGTAT TGTACTTGAA GGAAATTTCG AGCACGAGTC GCCGACTGAA
AACCAAGTCC GCAGTCTCGA AAGTCTATTA ACAAAACTTT CTAGGACCCA TTCTATCGAC
AGCAGTCATA TAGGTGCTCA TAAGCAGTAT GCAAAGACGG CATGCCCTGG AAAGAAACTG
CTAGAGATCT TACCGAAGAT CAAAAACAAT GTGTCCGTTC GTCTTGCAAG TCCTCAGCCG
TGA
|
|---|
| Protein sequence | MGRSTVESYN EVHYHKDIIR YRCMIILFAV TFSSTACAEE GVQIISRESW GANPATKPMA
DNKPVHLTIH HTGVRAKASI NLQAKLTSLQ KFSQSSAVLA DGRVKSAWAD VPYHYYIAVD
GLIAEGRMAK YVGDSNTIYN LQGHLSIVLE GNFEHESPTE NQVRSLESLL TKLSRTHSID
SSHIGAHKQY AKTACPGKKL LEILPKIKNN VSVRLASPQP
|
|---|
| |