| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1928 |
|---|
| Symbol | sucA |
|---|
| ID | 7116743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1991300 |
|---|
| End bp | 1994290 |
|---|
| Gene Length | 2991 bp |
|---|
| Protein Length | 996 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643524692 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_002420719 |
|---|
| Protein GI | 218529903 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.65661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCC AGGACGCGAA CGAAGCGCTT CTTCGAACCT CCTTCCTCTA CGGCGCCAAC
GCCGCCTGGA TCGAGGAGCT GCAGGCGGCC TATGCCCGCG ACCCGAACTC GGTCGATCCC
GAGTGGCAGC GCTTCTTCAA GGATCTGGGC GAGGACGACG CCCTGGTGAA GAAGAACGCC
GAGGGCGCCT CCTGGGCCAA GCCGAACTGG CCGGTCGTGG CCAACGGCGA GATCGTCTCG
GCGCTCGACG GCAATTGGGG CGCTCTCGAA AAGACGTTCG GCGAGAAGAT CCAGGCCAAG
GCCCAGCCCG GCAAGCCCGG CGACTCGACC AAGGGCGCAG CCATCGTCGC GGCCACCGGC
GTTTCCGTCG AGCAGGCCAC CAAAGATTCC GTGCGCGCGA TCATGCTGAT CCGCGCCTAC
CGCATGCGCG GCCACCTCCA CGCCAAGCTC GACCCGATCG GGCTCGCCCC GCGCGGTGAC
CACGAGGAGC TGCACCCGCA GCATTACGGC TTCCAGGAGA GCGACTGGGA CCGCAAGATC
TTCCTCGACA ACGTGCTCGG CATGGAATTC TCGACGATCC GCGAGATCGT CGCGATCCTG
GAGCGCACCT ACTGCCAGAC GCTCGGCGTC GAATTCATGC ACATCTCCGA TCCTGAGGAG
AAGGCGTGGA TCCAGGAGCG CATCGAGGGC AAGGACAAGG AAATCTCGTT CACGCCGGAA
GGCCGGCGGG CGATCCTGAA CAAGCTGATC GAGGCCGAGG GCTTCGAGAA GTTCCTCGAT
CTCAAATACA CCGGCACCAA GCGCTTCGGC CTCGACGGCG GCGAGTCCAT GGTCCCGGCC
ATGGAGCAGA TCATCAAGCG CGGCGGCGCG CTCGGCGTCG AGGAGATCGT GCTCGGCATG
GCCCATCGCG GCCGGCTGAA CGTGCTCACC AACGTGATGG CCAAGCCCTT CCGGGCGGTG
TTCCACGAGT TCAAGGGCGG CTCGGCCTCA CCCGCCGAGG TCGAGGGCTC GGGCGACGTG
AAGTACCATC TCGGCGCCTC GTCCGACCGC GCCTTCGACG ACAACACCGT CCACCTCTCG
CTCACCGCCA ACCCGTCCCA CCTCGAGATC GTCGATCCGG TGGTGCTGGG GAAGGTGCGG
GCCAAGCAGG ACCAGAAGGC CAAGCCGAAC GTCGAGCGCC GCCGCGTGCT GCCGCTCCTG
ATCCACGGCG ACGCGGCCTT TGCCGGCCAG GGCGTGGTGG CGGAATGCCT CGGACTGTCC
GGCCTGAAGG GTCACCGCAC CGGCGGCTCG ATCCACTTCA TCATCAACAA CCAGATCGGC
TTCACCACCG ATCCGCGCTT CTCGCGCTCC TCGCCCTATC CGTCCGACGT GGCGAAGATG
GTGGAGGCGC CGATCTTCCA CTGCAACGGC GACGACCCGG AGGCGGTGAC CTTCGCGGCG
AAGGTCGCGG TCGAGTACCG GCAAAAATTC GGCAAGCCGG TCGTGATCGA CATGCTGTGC
TACCGCCGCT TCGGCCATAA CGAGGGCGAC GAGCCGGCCT TCACCCAGCC GAAGATGTAC
CAGCGGATCC GCAAGCATCC GACCGCGCTG GAGACCTACG GCAAGAAGCT CGTCGCCCAG
GGTGACCTGA CCCAGGAGCA GCTCGACGCG CGCAAGGCCG AGTTCCGCGC GATGCTGGAA
AGCGAGCTTG AGGTCGCGGG CGGCTACAAG GCCAACAAGG CCGACTGGCT CGACGGCCGC
TGGTCCGGCT TCAAGGCCGT ACGCGAGGAC GTGGACGATC CCCGCCGCGG CCGCACCGGG
GTGCCGCTCG AGACGCTGCG CGACATCGCC ACCCGGATCA CCACGCCCCC GCCGGGCTTC
CACCTGCACC GCACGATCCA GCGCTTCTTC GACAACCGCG CCAAGGCGGT CGAGACAGGC
GTCGGCATCG ATTGGGCCAC CGCCGAGGCG CTCGCCTTCG GCTCGCTGCT GATCGAGGGG
CACCGGGTCC GGCTCTCGGG CCAGGACGTC GAGCGCGGCA CCTTCTCGCA GCGCCACGCC
GTGGTGATCG ATCAGGAGAA CGAGCAGCGC TACACGCCGC TCAACTCCCT GCGCGAGGGG
CAGGCGAACC TGGAGGTCAT CAACTCGATG CTCTCCGAGG AGGCGGTGCT CGGCTTCGAG
TACGGCTACT CGCTCGCCGA GCCGAACTCC CTGGTGCTGT GGGAGGCGCA GTTCGGCGAC
TTCGCCAACG GCGCGCAGGT CGTCATCGAC CAGTTCATCT CATCGGGCGA GCGCAAGTGG
CTGCGCATGT CCGGCCTCGT GATGCTGCTG CCTCACGGCT ACGAGGGCCA GGGGCCGGAG
CACTCGTCCG CCCGTCTGGA GCGCTATCTC CAGATGTGCG CCGAGGACAA CATGCAGGTC
GCCAACTGCT CGACGCCCTC GAACTACTTC CACATCCTGC GCCGTCAGTT GAAGCGCGAC
TTCCGCAAGC CGCTGATCCT GATGACGCCG AAATCGCTGC TGCGCCACAA GCGGGCGGTC
TCGAAGATCG AGGACATCGC GGACGGCTCG ACCTTCCACC GCATCCTGTG GGACGATGCC
GAGCACGACG AGAACGGCGT GAAGCTCGTG CGCGACGACA AGATCCGCCG CGTCGTGCTG
TGCTCGGGCA AGGTCTATTA CGACCTCTAC GAGGAGCGGG AGAAGCGCGG CGTCAACGAC
GTCTACCTGA TGCGCGTCGA GCAGCTCTAC CCGTTCCCGC TCAAGGCCCT GGCCAACGAG
ATGACCCGCT TCCGCAACGC GGAGGTGGTG TGGTGCCAGG AAGAGCCCAA GAACATGGGC
TCGTGGACCT TCGTCGAGCC CTATCTCGAT TGGGTACTGG GCCAGGCCGG CTCCGCCTCG
AAGCGCGCCC GCTATGTCGG CCGTCCGGCC TCGGCCTCGA CCGCGGTCGG CCTGATGTCG
AAGCACCTCG CCCAGCTCCA GGCCTTCCTC AACGAGGCGC TGGCGGTCTG A
|
|---|
| Protein sequence | MARQDANEAL LRTSFLYGAN AAWIEELQAA YARDPNSVDP EWQRFFKDLG EDDALVKKNA
EGASWAKPNW PVVANGEIVS ALDGNWGALE KTFGEKIQAK AQPGKPGDST KGAAIVAATG
VSVEQATKDS VRAIMLIRAY RMRGHLHAKL DPIGLAPRGD HEELHPQHYG FQESDWDRKI
FLDNVLGMEF STIREIVAIL ERTYCQTLGV EFMHISDPEE KAWIQERIEG KDKEISFTPE
GRRAILNKLI EAEGFEKFLD LKYTGTKRFG LDGGESMVPA MEQIIKRGGA LGVEEIVLGM
AHRGRLNVLT NVMAKPFRAV FHEFKGGSAS PAEVEGSGDV KYHLGASSDR AFDDNTVHLS
LTANPSHLEI VDPVVLGKVR AKQDQKAKPN VERRRVLPLL IHGDAAFAGQ GVVAECLGLS
GLKGHRTGGS IHFIINNQIG FTTDPRFSRS SPYPSDVAKM VEAPIFHCNG DDPEAVTFAA
KVAVEYRQKF GKPVVIDMLC YRRFGHNEGD EPAFTQPKMY QRIRKHPTAL ETYGKKLVAQ
GDLTQEQLDA RKAEFRAMLE SELEVAGGYK ANKADWLDGR WSGFKAVRED VDDPRRGRTG
VPLETLRDIA TRITTPPPGF HLHRTIQRFF DNRAKAVETG VGIDWATAEA LAFGSLLIEG
HRVRLSGQDV ERGTFSQRHA VVIDQENEQR YTPLNSLREG QANLEVINSM LSEEAVLGFE
YGYSLAEPNS LVLWEAQFGD FANGAQVVID QFISSGERKW LRMSGLVMLL PHGYEGQGPE
HSSARLERYL QMCAEDNMQV ANCSTPSNYF HILRRQLKRD FRKPLILMTP KSLLRHKRAV
SKIEDIADGS TFHRILWDDA EHDENGVKLV RDDKIRRVVL CSGKVYYDLY EEREKRGVND
VYLMRVEQLY PFPLKALANE MTRFRNAEVV WCQEEPKNMG SWTFVEPYLD WVLGQAGSAS
KRARYVGRPA SASTAVGLMS KHLAQLQAFL NEALAV
|
|---|
| |