Gene Mchl_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1926 
Symbol 
ID7116741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1988983 
End bp1990179 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content66% 
IMG OID643524690 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_002420717 
Protein GI218529901 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.826279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC ACGAATACCA GGCCAAGGCT GTCCTGAAGG AATTCGGCCT GCCGGTCTCC 
CGCGGCGTGC CGATCTTCAA GCCGGAGGAG GCCGCTGCGG CGGCCGACGA ACTCGGCGGC
CCGGTCTGGG TGGTGAAATC GCAGATCCAT GCGGGCGGGC GCGGCAAGGG CACCTTCAAG
GGCGCGCCCG AGGGCGCCAA GGGCGGTGTG CGCGTCACCA AGTCCAAGGA CGAGGTGGTG
CAGTTCGCCC GCGAGATGCT CGGGCAGACG CTCGTGACCG TGCAGACCGG CGAGGCCGGC
AAGCAGGTCA ACCGCCTCTA CATCGAGGAA GGCGCGGCGA TCGCCGCCGA GTTCTACCTG
TCGATGTTGG TCGATCGCGA GACCGGCCGC GTCGCCTTCG TCGTCTCGAC GGAAGGCGGC
ATGGATATCG AGCAGGTCGC CCACGACACC CCTGAGAAGA TCGTCACCTT CTCGGTCGAT
CCGGCCACCG GCATCATGCC CCATCACGGC CGGGCCGTCG CCAAGGCGCT CGGCCTCTCC
GGGCCCCAGG CCAAGGAAGC GGGCGCGCTC ACCGAGAAGC TCTACGCGGC CTTCACGGCC
AAGGACATGA GCATGCTGGA GATCAACCCG CTGGTGCTCA CCGGTGACGG CGGTCTCAAG
TGCCTCGACG CCAAGATCTC GTTCGATTCG AACGCCCTCT ACCGCCACCC CGAGATCGTC
GCGCTGCGCG ACGAGACCGA GGAGGACGCC AAGGAGATCG AGGCCTCGAA ATACGACCTC
GCCTACATCG CCCTCGACGG CACCATCGGC TGCATGGTCA ACGGCGCCGG CCTCGCCATG
GCGACGCTCG ACATCATCAA GCTCTACGGC GAGGAGCCGG CGAACTTTCT CGATGTCGGC
GGCGGCGCCT CCGAGGAGAA GGTCACGGCG GCCTTCAAAA TCATCACCGC CGACCCGCAG
GTGAAGGGCA TCCTCGTCAA CATCTTCGGC GGGATCATGA AGTGCGACGT CATCGCCCGC
GGCGTGATCG CGGCGGTGAA GGCGGTCGGC CTCGAAGTGC CGCTCGTCGT GCGTCTGGAA
GGCACCAACG TCGAGGAGGG CAAGGAGATC ATCCGGAACT CCGGCCTCAA CGTGATCCCC
GCGGACGATC TGGATGACGC CGCGCAGAAG ATCGTCGCCG CGGTGAAGAA GGGTTGA
 
Protein sequence
MNIHEYQAKA VLKEFGLPVS RGVPIFKPEE AAAAADELGG PVWVVKSQIH AGGRGKGTFK 
GAPEGAKGGV RVTKSKDEVV QFAREMLGQT LVTVQTGEAG KQVNRLYIEE GAAIAAEFYL
SMLVDRETGR VAFVVSTEGG MDIEQVAHDT PEKIVTFSVD PATGIMPHHG RAVAKALGLS
GPQAKEAGAL TEKLYAAFTA KDMSMLEINP LVLTGDGGLK CLDAKISFDS NALYRHPEIV
ALRDETEEDA KEIEASKYDL AYIALDGTIG CMVNGAGLAM ATLDIIKLYG EEPANFLDVG
GGASEEKVTA AFKIITADPQ VKGILVNIFG GIMKCDVIAR GVIAAVKAVG LEVPLVVRLE
GTNVEEGKEI IRNSGLNVIP ADDLDDAAQK IVAAVKKG