Gene Mchl_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1925 
Symbol 
ID7116740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1987943 
End bp1988905 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content67% 
IMG OID643524689 
Productmalate dehydrogenase, NAD-dependent 
Protein accessionYP_002420716 
Protein GI218529900 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01763] malate dehydrogenase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.282591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.451174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA GCAAGATCGC GCTCATCGGC GCCGGACAGA TCGGCGGCAC GCTGGCCCAT 
CTCGCCGGCC TCAAGGAACT CGGTGACGTG GTGCTGTTCG ACATCGTCGA CGGCGTGCCG
CAGGGCAAGG CGCTCGACAT CGCCGAATCC GCTCCCGTCG ACGGCTTCGA CGCCAAGTAT
TCGGGCGCGA GCGACTATTC CGCGATCGCC GGGGCCGACG TGGTGATCGT GACCGCGGGC
GTGCCGCGCA AGCCCGGCAT GAGCCGTGAC GACCTCATCG GCATCAACCT GAAGGTGATG
GAAGCGGTCG GCGCCGGCAT CAAGGAGCAC GCGCCCGACG CCTTCGTGAT CTGCATCACC
AACCCGCTCG ACGCGATGGT GTGGGCGCTG CAGAAGTTCT CGGGGCTGCC GACCAACAAG
GTCGTCGGCA TGGCCGGCGT GCTCGACTCC GCCCGCTTCC GCCACTTCCT GGCCGAAGAG
TTCGGCGTCT CGGTCGAGGA CGTGACCGCC TTCGTGCTCG GCGGCCACGG CGACGACATG
GTGCCGCTGA CCCGCTACTC GACGGTGGCC GGCGTGCCGC TGACCGATCT GGTCAAGCTC
GGCTGGACCA CCCAGGAGAA GCTCGACGCC ATGGTCGAGC GCACCCGCAA GGGCGGCGGC
GAGATCGTCA ACCTCCTGAA GACCGGCTCG GCCTTCTACG CGCCCGCCGC CTCCGCCATC
GCCATGGCCG AGAGCTACCT GCGCGACAAG AAGCGAGTTC TGCCCTGCGC CGCCTACCTC
GACGGCCAGT ACGGCATCGA CGGCCTCTAT GTCGGCGTGC CGGTGGTGAT CGGCGAGAAC
GGCGTCGAGC GTGTGCTCGA AGTGACCTTC AACGACGACG AGAAGGCGAT GTTCGAGAAG
TCGGTCAATT CGGTGAAGGG CTTGATCGAG GCCTGCAAGA GCGTCAACGA CAAGCTCGCG
TAA
 
Protein sequence
MARSKIALIG AGQIGGTLAH LAGLKELGDV VLFDIVDGVP QGKALDIAES APVDGFDAKY 
SGASDYSAIA GADVVIVTAG VPRKPGMSRD DLIGINLKVM EAVGAGIKEH APDAFVICIT
NPLDAMVWAL QKFSGLPTNK VVGMAGVLDS ARFRHFLAEE FGVSVEDVTA FVLGGHGDDM
VPLTRYSTVA GVPLTDLVKL GWTTQEKLDA MVERTRKGGG EIVNLLKTGS AFYAPAASAI
AMAESYLRDK KRVLPCAAYL DGQYGIDGLY VGVPVVIGEN GVERVLEVTF NDDEKAMFEK
SVNSVKGLIE ACKSVNDKLA