| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1924 |
|---|
| Symbol | |
|---|
| ID | 7116739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1986861 |
|---|
| End bp | 1987592 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643524688 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002420715 |
|---|
| Protein GI | 218529899 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.436993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCGT ACGGATCTTT CACCATCCCC GTCACCCTGG CCGAGAGCGA GAGGGAGGCG
AACGATCCAG TTTCCGATCC GCGTGCCGCT CCCTCTCGAC CGTCGCGTCT CACCGGCCCG
GCCGCCCGCG CCCGGTCCAC GCCGGTCTCG ACGGACGCGC GGCTGCTCGC CATCGCCACG
GAGCACCTGA CCCGGCTCGG CCCGAAACGG GTGACGGTGG TGGCGGTCGC GGCGGAGGCT
GGCATGACCC ATGCCAACGT CTACCGCTAC TTCCCCTCGA AGGACGCCCT GCTCGATGCG
GTCGCCGGCC GCTGGCTGCG CGATTTGGAA ACCGAGCTCG CCGGCATCGC CGACGCGCCC
GATCCCGCCG ACGACAAGAT CGAGCGCTTC GTCAGCGCGC TGGCCAGCGC ACAGAGCGAG
ATGCTGACCC GCGAACCGAA CCTGTTCGCC GTGCATCTCG ACGCCACCGT CGCCTCCCGT
CCGATCGCCC GCCGACACCG CGTTCGGCTG CGCGCGCTCG TCGAGCGCGT GGTGGAGGAG
GGCATCGGCA CCGGCGTCTT CGCCGCCCGC GACCGCGAAC GCGCCATCGC CGTCATCTTC
GACGCGAGCT ACCGCTTCAC CCATCCGGTC GCGATCCAGC ACGACGCTGA CGTGCCCCGC
GATCTGCTCG ATGCCCGGCT CGGCGCGGTC ATCCAATCGA TCCAGCGGGC GCTGCGGACC
GGTACTTTCT GA
|
|---|
| Protein sequence | MLPYGSFTIP VTLAESEREA NDPVSDPRAA PSRPSRLTGP AARARSTPVS TDARLLAIAT
EHLTRLGPKR VTVVAVAAEA GMTHANVYRY FPSKDALLDA VAGRWLRDLE TELAGIADAP
DPADDKIERF VSALASAQSE MLTREPNLFA VHLDATVASR PIARRHRVRL RALVERVVEE
GIGTGVFAAR DRERAIAVIF DASYRFTHPV AIQHDADVPR DLLDARLGAV IQSIQRALRT
GTF
|
|---|
| |