Gene Mchl_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1899 
Symbol 
ID7116714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1958912 
End bp1959373 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content67% 
IMG OID643524663 
Productprotein TolR 
Protein accessionYP_002420690 
Protein GI218529874 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.937922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGG GAACCGCGCG TTCGGCGAGC GACGACGAGG ACGGCCTCGA CGCCACGCCG 
ATGTCCGAGA TCAACGTCAC GCCGATGGTC GACGTGATGC TGGTGCTGCT GATCATCTTC
ATGGTGGCCG CGCCGCTGAT GACGACGGGC GTGCCGGTGC AACTGCCGAA GACGACCGCC
GCCAAGGTGG CGCAGTCGCA GAAGCCGCTC GAAGTCTCCA TCGACAAGGA CGGCAATCCG
TTCATCGCCA AGGACGGCTT CACGCCGGAG ACGATCCTGC CGCGCCTCAA GCAGCTCAGG
GCGGAGAACC CGGATCAGGT CGTGCTCGTG CGCGGCGACC GGGAGGTGCC CTACGGCCGG
ATCATGGAGG TGATGGGCCT CGTCGGTCAG GCGGGCTTCA CCAAGGTCTC GCTGATTGCC
CAATCGGCGG GTGGCGCGCC GGCCGCAGGG ACGCCCCGTT AA
 
Protein sequence
MAMGTARSAS DDEDGLDATP MSEINVTPMV DVMLVLLIIF MVAAPLMTTG VPVQLPKTTA 
AKVAQSQKPL EVSIDKDGNP FIAKDGFTPE TILPRLKQLR AENPDQVVLV RGDREVPYGR
IMEVMGLVGQ AGFTKVSLIA QSAGGAPAAG TPR