Gene Mchl_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1885 
Symbol 
ID7113613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1947582 
End bp1948634 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content73% 
IMG OID643524649 
Productpolysaccharide deacetylase 
Protein accessionYP_002420676 
Protein GI218529860 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.227771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGC CCCGCACCCG ACACCGCCTG TTCCGCGCCG GCTTTCGGGC GATCACCGCC 
ACGGGGGCCG ACCGCTGGCT CGCCCCCGCT GCCCGCGGGC GCGGCGTGAT CCTCACCTTC
CACCATGTCC GCCCCGAGCC GGTGCCGGGC TTCGCCCCGA ACGCCCTCTT GTCGATCACC
CCCGCCTTCC TGGAGCGGAC GCTGGCGCTG CTGGCCGCCC GCGGCTTCGA CCTCATCGGC
CTCGACCAAG TCCCCGAGCG GCTCGCGGCC CCGGAAAGCG GAAAGCCCTT CGCGGTGCTG
ACCTTCGACG ACGGCTACCG CGACAATGTC GAGCACGCCC GGCCCGTGCT GGCGCGGCAC
GGGGCGCCGT GGACGCTGTT CGTGACGAGC GATTTCGCCG AGGGGCGCGG ACGGCTGTGG
TGGCTCGAAC TGGAGCGGGC CGTGGCCCGG CTCGACGCGG TGCGACTCGG CTCCGGCCTC
GTCCTGCCGG CCCGCACGGA TGCCGAGAAG ACGGCCGCCT TCGAGACGGT CTATCGCGCC
CTGCGCGCCG GCCCGGAGCC GGTCCTGCTC GATGAGATTG CCCGGTTATG CCGCGAGGCC
GGATTCGAGC CGGGCGGGCT CGCCCGCGAG CTCTGCCTGA ACTGGGGTGA ATTGCGCGAT
CTCGCCCGCG ACCCGGCCGT CTGCATCGGC GCGCACACGC TCTCGCACCC GATGCTCGCC
AAGCACGACG CCGCCTTCGC CGAACGGGAG ATGGCCGAGA GCCGCGCGCG GATCGAGGCG
GAGCTGGGCC GCCCCGTGCG CCACCTGTCC TATCCCGTCG GCGATCCGAC TTCCGCCGGG
AGGCGGGAAT TTGAAACGGC AAAAAGACTC GGCTTCGCCA CCGGGGTGAC GACCCGGCCG
GGCCATCTGT TCGCAGGGCA CGCGGACCAT GTCCACGCGC TGCCGCGGGT GTCGGTGAAC
GGGCTGCACC AGAGCGACGC GGCGCTGGCC AGTCTTCTCT CCGGCGTGCC GTTCCTGGCC
TGGAACCGCG GGCGGCGGCT CAACGTGGCG TGA
 
Protein sequence
MLSPRTRHRL FRAGFRAITA TGADRWLAPA ARGRGVILTF HHVRPEPVPG FAPNALLSIT 
PAFLERTLAL LAARGFDLIG LDQVPERLAA PESGKPFAVL TFDDGYRDNV EHARPVLARH
GAPWTLFVTS DFAEGRGRLW WLELERAVAR LDAVRLGSGL VLPARTDAEK TAAFETVYRA
LRAGPEPVLL DEIARLCREA GFEPGGLARE LCLNWGELRD LARDPAVCIG AHTLSHPMLA
KHDAAFAERE MAESRARIEA ELGRPVRHLS YPVGDPTSAG RREFETAKRL GFATGVTTRP
GHLFAGHADH VHALPRVSVN GLHQSDAALA SLLSGVPFLA WNRGRRLNVA