| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1878 |
|---|
| Symbol | ispG |
|---|
| ID | 7113606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1936676 |
|---|
| End bp | 1938004 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643524642 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_002420669 |
|---|
| Protein GI | 218529853 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.186832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.131139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCA TGGAAGCTCC CGACGCCCTG GCAAACCCGA TCGACTCCCG CAGCCCCAGC
ATGACGGGGC CGGAGATCGC CGGTCCGGCA CCGCGCCACC ACACCGTCGG CGTGCAGATC
GGCAGCGGCG AAGGGGCCGT CACCGTCGGC GGCGGCGCCC CGATCGTCGT GCAGTCGATG
ACCAACACCG ACACGGCCGA CATCGACGGC ACCGTGGCCC AGGTCGCCCA GCTCGCCCGC
GCCGGCTCGG AGCTGGTGCG CATCACCGTC GATCGCGACG AGGCGGCGGC CGCCGTGCCG
AAGATCCGCG AGCGGCTCGA CCGCATCGGC GTGCACGTGC CGCTGATAGG CGACTTCCAC
TACATCGGTC ACAAGCTCCT CTCCGACCAT CCGGCCTGCG CCGAGGCGCT GGCCAAGTAC
CGGATCAATC CGGGCAATGT CGGCTTCAAG GAGAAGAAGG ACACCCAGTT CTCGACCATC
GTCGAGCAGG CGGTCCGCTA CGGCAAGACG GTCCGCATCG GCGCGAACTG GGGTTCGCTC
GATGGCGAAC TCCTCACCCA CCTGATGGAC GAGAACGCCA AGCTGCCCCG CCCCATCGAT
GCCCGCGCGG TCATGCGCGA GGCGATGGTG CAGTCGGCGC TGACCTCCGC CGACCGGGCG
GTGGCGCTCG GCCTGCCGAA GGACCGCATC ATCCTCTCGG CCAAGGTCTC GGCGGTGCAG
GATCTGATCG CGGTCTACCG CGAGGTGGCG CGCCGCTCCG ACTACGCGAT CCATCTCGGC
CTGACCGAGG CCGGCATGGG CTCGAAGGGC ATCGTCGCCG CCTCCGCCGC CATCGGCGTG
CTGCTGCAAG AGGGCATTGG CGACACGATC CGCTACTCGC TGACGCCCGA GCCCGGCGGC
GACCGGACCG TGGAAGTGAA GGCCGCGCAG GAACTCCTGC AGACCATGGG CTTCCGCACC
TTCGTGCCGC TCGTGGCGGC GTGCCCCGGC TGCGGCCGGA CGACCTCGAC CACGTTCCAG
GAACTCGCCC GCGACATCCA GAACTGGATC TCCACCTCCA TGCCGGAGTG GAAGAAGACC
TATCCGGGCG TGGAAGGCCT CAACGTCGCG GTGATGGGCT GCATCGTGAA CGGTCCCGGC
GAATCGAAGC ATGCCGATAT CGGCATCTCG CTGCCCGGCA CCGGCGAGAG CCCGAGCGCC
CCGGTCTTCA TCGACGGCAA GAAGGCGATG ACCCTGCGCG GCGCCACGCT CGCCAAGGAC
TTCGAGACGA TCGTGGTCGA TTACATCGAG CGCCGCTTCG GCCAGGGCAA GCGCGACGCC
GCCGAGTGA
|
|---|
| Protein sequence | MEVMEAPDAL ANPIDSRSPS MTGPEIAGPA PRHHTVGVQI GSGEGAVTVG GGAPIVVQSM
TNTDTADIDG TVAQVAQLAR AGSELVRITV DRDEAAAAVP KIRERLDRIG VHVPLIGDFH
YIGHKLLSDH PACAEALAKY RINPGNVGFK EKKDTQFSTI VEQAVRYGKT VRIGANWGSL
DGELLTHLMD ENAKLPRPID ARAVMREAMV QSALTSADRA VALGLPKDRI ILSAKVSAVQ
DLIAVYREVA RRSDYAIHLG LTEAGMGSKG IVAASAAIGV LLQEGIGDTI RYSLTPEPGG
DRTVEVKAAQ ELLQTMGFRT FVPLVAACPG CGRTTSTTFQ ELARDIQNWI STSMPEWKKT
YPGVEGLNVA VMGCIVNGPG ESKHADIGIS LPGTGESPSA PVFIDGKKAM TLRGATLAKD
FETIVVDYIE RRFGQGKRDA AE
|
|---|
| |