Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1866 |
Symbol | holA |
ID | 7113594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1923764 |
End bp | 1924795 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643524630 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_002420657 |
Protein GI | 218529841 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0971828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG TCAAAGCCGG CGATGTCGAG GGGCTGGTCC GGCGCGGCCC CGATCCGCGC ATTGCGGTGG TTCTGGTCTA TGGGCCGGAT GTCGGCCTCG TGGCCGACCG GGCGATGCGG CTGGTCCGGG GGATGGTCGC CGACCCCGAC GACCCCTTCG CGCTGATCAG GATCGACGGC GACACCCTTG CCTCCGACCC GGGCCGCTTG GTGGACGAGG CCGGCACCGT CGGCCTGTTC GGCGGCAGCC GCACGATCTG GGTCCGCTCC GGCAGCCGCA ACTACGCGCC GGCCGTCGAT GCCGTGCTGA AGGCGCCCAC CGAAGGCGCC CGCATCGTCG TGGAGGCGGG CGACCTCGCT CGCTCCGCCC CCCTGCGCAC GCTCTGCGAG GGATCGCCCA AGGCGCTCGC CCTGCCTTGC TACACCGACG ACGAACGCAC GCTCGCCGAT CTGATCGAGC GCACGTTGCA GGAGGACGGG CTGCGCATCG ACCGCGACGC CCGCGACCTG CTGACGGGCA GCCTCGGCAG CGACCGCCGC GCCAGCCTGT CCGAGATCGG TAAGCTCGCC CTCTACGCCC GCGGCCAGGG CAGCGTCGGC GTGGACGACG TCGAGGCGAT CGTCAGCGAT GTCGGGGCGA GCGTGCTCAA CGCGCTGATC GACGCGGCCT TCGCCGGCCG TGCCAGCGAG GCCGAGCGCG AGTATCGCCG CTTCCGCCAC GAGGGGATGG ACCCCTCGGC GATGCTCGGC GCCGGGTTGC GCCACGCGCT CACCCTGCTC TCCCTACGCC TCGACAATCC GCGCGGCAGC GCGAGCCAGC TCGTCGCCAA TTGGCGCGGC CTGCATTTCC GCCGCAAGGC GCTGGCTGAA ACCCAGCTCG CCCGCTGGTC GGCACCGGGG CTGCAACAGG CCGTGGCGTG GCTCCAGGAC GCGGTGCTCG CCTGCCGCCG CTCGGAGCCG GACCTCGCCC ATGCTCAGGC GCAGGGCGTG TTCCTGCGGA TCGCCATCGA GACCGCGCGG CGGCGCGCCT GA
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Protein sequence | MTAVKAGDVE GLVRRGPDPR IAVVLVYGPD VGLVADRAMR LVRGMVADPD DPFALIRIDG DTLASDPGRL VDEAGTVGLF GGSRTIWVRS GSRNYAPAVD AVLKAPTEGA RIVVEAGDLA RSAPLRTLCE GSPKALALPC YTDDERTLAD LIERTLQEDG LRIDRDARDL LTGSLGSDRR ASLSEIGKLA LYARGQGSVG VDDVEAIVSD VGASVLNALI DAAFAGRASE AEREYRRFRH EGMDPSAMLG AGLRHALTLL SLRLDNPRGS ASQLVANWRG LHFRRKALAE TQLARWSAPG LQQAVAWLQD AVLACRRSEP DLAHAQAQGV FLRIAIETAR RRA
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