Gene Mchl_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1860 
Symbol 
ID7113588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1917461 
End bp1918483 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID643524624 
ProductPAS sensor protein 
Protein accessionYP_002420651 
Protein GI218529835 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.504113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG CGGATCTCAG CTTCACCTCG TCCGACTTCC TCCGGCTCCT GGAAGGTCTC 
GGCCTCACCG GTAGCTGGGG CTGGACGCTT GCGACGGGGG ACCAAGTTTG GTCGCCTGGC
CTCTTCCGCC TGCTCGGGCT TGAGGTCGGC GAGGTCACAC CGAGCTATGA ACGGCTGATC
CAGTTCGTAC ACCCGGAGGA TCAGGCCCGG CTCGAGCGAG CGGATGACGT CAGACGCGAC
GGTTTGCTCG GCACGCACAC GGTCCGTGTG CTGCGCCCCG ACGGGGCCCT GCGGATCCTG
AACCTTCAGG GCACCGTCTA TCACACGCCC GAAGGCCGCC CGCGCGCGGC GGCCGGCATC
GTGCTGGATG TGACGGATCG CGAGCAGATG GCGGCGGCGT TGCGCATGGA GCGCCGTCGC
CAATGGGCCC TGTTCGAGGT GCTGCAATCC TGGTCCAATG CCGCGCTCTA TGTCGGTGGG
CAGCGGACAG CGTCGCCCGA GATCCTCAGT CTGACCGGTG TGAGCGCGGA GGTGTTCAGG
GCCGATTGCG ACCGGATCGT CGCCCCGGAC GACCGCGCCC GCATGCGAGC CCACATTCAG
GCCATGATCG CCGAGGGGAA GTCGTTCGAG GTCTCGAAGC GCCTGCTCTT GGCGAATGGC
GACGAGGGCG CGTTCCGCTT TCTCTACACC CCTGTTCGCG ACGCCGCGGG GCGCACCGAG
ACCTGGGCGA CCTACGCCTC GCGGCTCGGT GGCCCCAAGG CTCCTGTCAT CGATCCGGTG
CGCCGAGGGC TGGTGCAGGG CATCGATGGC AGCCATTTGC GGGCGGCGCG GGCGCTGCTG
GGCTGGTCGA TGCAGGATCT GGCTCAGGCG GGCGGGCTGT CCTTCGCCAC CGTCCGCCGC
CTCGAAGAGA ATGCCGGCGG GCGTCGTGCC CACAGCCATG AGAGGGCCGT CGCCGCGCTT
CAGAAGGGCG GGATCGGCTT CCAGATCGTC GAGGGCAACC GGATCGCGCT GTTCCGGCGC
TAG
 
Protein sequence
MNAADLSFTS SDFLRLLEGL GLTGSWGWTL ATGDQVWSPG LFRLLGLEVG EVTPSYERLI 
QFVHPEDQAR LERADDVRRD GLLGTHTVRV LRPDGALRIL NLQGTVYHTP EGRPRAAAGI
VLDVTDREQM AAALRMERRR QWALFEVLQS WSNAALYVGG QRTASPEILS LTGVSAEVFR
ADCDRIVAPD DRARMRAHIQ AMIAEGKSFE VSKRLLLANG DEGAFRFLYT PVRDAAGRTE
TWATYASRLG GPKAPVIDPV RRGLVQGIDG SHLRAARALL GWSMQDLAQA GGLSFATVRR
LEENAGGRRA HSHERAVAAL QKGGIGFQIV EGNRIALFRR