| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1859 |
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| Symbol | trmE |
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| ID | 7113587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 1916113 |
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| End bp | 1917447 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643524623 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002420650 |
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| Protein GI | 218529834 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.517365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAC CCCTTCCCCA GCGCGACGAC ACCATCTTCG CTCCGGCGAG CGGCTTCGGC
CGTGCGGCGG TGACGGTGGT GCGCATCAGC GGGCCGGCGG CGGGGTTGGC GCTCGACCGG
CTGGCCGGCG GGCGCCCGGA GCCGCGCCGT CTCTCCCTGC GCCGCCTGCG CGACCCTGAC
TCCCGCGACC TCCTCGATCA GGCCCTCGTG GCATGGTTGC CGGGCCCTGC CACCGCCACC
GGCGAGGACA TGGCCGAGCT GCACCTGCAT GGGGGCCTGG CCGTGCGGTC CGCCGTGCTG
CGGGCGCTCG CAGGCGTGCC GGGTTGCCGG CCGGCGGAGG CCGGGGCGTT CAGCCGCCGT
GCCTTCCTCA ACGGCCGCAT CGACCTGACC GAGGCGGAGG GCATCGCCGA CCTCATCGAC
GCCGAGACCG AAGCGCAGCG TGTCCAGGCC CTGCGTCAGC TCGACGGCGC CCTCGGCCGC
CAGGTCGCCG CATGGCGCGA GACCGGCATC GATCTGCTCG CCGGAGCGGA GGCGGCCCTC
GATTTTGCCG ATGAAGGCGA TGTCGATGAC GCCGACCTCG ACGCCGCCCT GTCCGGTCGC
GCCACCGCCC TGCGCGATGC GATCCGAGCC GCGCTGGCCG ACGGACGCCG GGGCGAGCGC
CTGCGCGAGG GGTTCTGCGT CGTGCTGGCG GGCGCTCCCA ATGCCGGAAA ATCGACCCTG
CTCAATGCGC TGAGCGGGCG CGACGCGGCC ATCGTTTCCG ACATTCCCGG CACGACCCGC
GATGCCATCG ATGTGCGCTG CGATCTCGGC GGGCTGCCGG TCGTATTGGT CGATACCGCG
GGCCTGCGCG AGACGGCCGA TGCGATCGAG GCGGAGGGCG TCAAGCGCAC GCAAAGCCGT
ATCCGCAGCG CCGACCTCGT GCTCCATCTC GTGCCGGCGG ACGGCGAGGC CGACGCGGGG
CGGTTTGCGG ACGTCCCCGT CCTTCTCGTT CGCACGAAAA CCGACCTCGC GCCGGAGGGG
CCGGGGGAGG GCAGCCTCGC CATCTCCGCC GTCACGGGTG CTGGGCTCGA CGCGCTGTTG
GATGCGATCC AGGCCTCGGC CCAAACGGCC CTCGGTCAGG GCGACGCCCT CGTCACCCGT
GAGCGTCATC GCGAGGCTTT GTCCCGGGCT GCGGCTCATC TCGACCGTGT CGCCACCGCA
GCGGCCGGTT TCCCGCCGGA ACTGGTGGCG GAGGATCTCC GGCTCGCCGT CCGGGCGCTG
GGCGAGGTCG GGGGGCATGT CGGCGTCGAG GAGATGCTGG ACCGCCTCTT CGCCGGTTTC
TGCATCGGCA AGTAA
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| Protein sequence | MPPPLPQRDD TIFAPASGFG RAAVTVVRIS GPAAGLALDR LAGGRPEPRR LSLRRLRDPD
SRDLLDQALV AWLPGPATAT GEDMAELHLH GGLAVRSAVL RALAGVPGCR PAEAGAFSRR
AFLNGRIDLT EAEGIADLID AETEAQRVQA LRQLDGALGR QVAAWRETGI DLLAGAEAAL
DFADEGDVDD ADLDAALSGR ATALRDAIRA ALADGRRGER LREGFCVVLA GAPNAGKSTL
LNALSGRDAA IVSDIPGTTR DAIDVRCDLG GLPVVLVDTA GLRETADAIE AEGVKRTQSR
IRSADLVLHL VPADGEADAG RFADVPVLLV RTKTDLAPEG PGEGSLAISA VTGAGLDALL
DAIQASAQTA LGQGDALVTR ERHREALSRA AAHLDRVATA AAGFPPELVA EDLRLAVRAL
GEVGGHVGVE EMLDRLFAGF CIGK
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