| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1855 |
|---|
| Symbol | |
|---|
| ID | 7113583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1910733 |
|---|
| End bp | 1911419 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643524619 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002420646 |
|---|
| Protein GI | 218529830 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.848692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACC CCTATTGCCT CCTCGTCTGT GACGACGACG ACGCCCTGCG TGAGGCATTG
ACGGAACAGA TCGACGCCTA CGACGAATTC TCCGTCATCG GCGAGCCGAC CGCGACCGGG
GCGCTGAACC GCGTCACGCA GGAGCCGGTC GATCTCGTGG TGATGGATGT CGCGCTGCCG
GATATGGACG GGCGCGAGGC GGTGCGGACC CTGCGCCGCA ACGGCTATCG CGGCCCGATC
ATCATGCTGA CCGCGCAGGA ATCCGACGAC GACATGGTCG AGGGCCTCGA GGCGGGCGCC
AACGATTACG TGGTCAAGCC ATTCAAGTTC GCCGTGCTTC TCGCCCGCAT CCGGGTGCAA
CTGCGCCAGC ATGAGGCGAG CGAGGATGCG GTGTTCCGCA TCGGCCCCTA CACCTTCCGG
CCCGGGGCCA AGCTGCTGGT CGGCGAGCGC GGCTCCAAGC TGAAGCTCAC CGAGAAGGAG
ACGGCGATTC TGCGCTACCT CTACCGGGCG GGCCGCGAGG TGGTCGGGCG CGATACGCTG
CTCGCCGAGG TCTGGGGCTA CAACGCTCAC GTCACCACCC ACACCCTCGA AACGCATATC
TACCGGCTGC GCCAGAAGAT CGAGCCGAAC CCGGCGGTCG CCGCGATCCT CGTCACCGAA
GGCGGCGGCT ACAAGCTGCT GCCCTAA
|
|---|
| Protein sequence | MSNPYCLLVC DDDDALREAL TEQIDAYDEF SVIGEPTATG ALNRVTQEPV DLVVMDVALP
DMDGREAVRT LRRNGYRGPI IMLTAQESDD DMVEGLEAGA NDYVVKPFKF AVLLARIRVQ
LRQHEASEDA VFRIGPYTFR PGAKLLVGER GSKLKLTEKE TAILRYLYRA GREVVGRDTL
LAEVWGYNAH VTTHTLETHI YRLRQKIEPN PAVAAILVTE GGGYKLLP
|
|---|
| |