Gene Mchl_1816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1816 
Symbol 
ID7113544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1870616 
End bp1871710 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID643524580 
ProductUV damage repair endonuclease 
Protein accessionYP_002420607 
Protein GI218529791 
COG category[L] Replication, recombination and repair 
COG ID[COG4294] UV damage repair endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.059052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.129847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA AGCCCAACCC CTCCCAGCCC AACACCGCCG AGCCGCCTCG CCTCGGCTTC 
TGCTGCACCT TCATTCCCGA TCCGGACCCG GCCCACAAAA CCCTGAAAGC CGCCAAGGAC
GCGGCCAAGC TGATGAATCT CGGCACGGTG ACGATGGCGC ATCTGGAGCG CCTCGGGCCC
ACCGCGCGCT TCGAGAAGCT CGAGGGCGTG GTGCGCCACA ACCTCGCGGC GCTGGAACGC
CAGATCGCCT GGGTGTCGGC CCGGCCACCC CTGGAGCGGC TGCTGCGCAT GGCGAGCTCG
GTCCTGCCCG GCTACACCCA TCCGGTGGCC GAGCCGCTCT ATGCGCAAGC CCCGATGCGC
GCCCTGATCG AGGCCGGCCT CGCCCGGATC GGCGAGCAGG CGCGGGCAGG CGACGTGCGG
CTCAGCATGC ATCCCGGCCC GTTCTGCATC ATCGCCTCGC GCAACCCGAA CGCGCAGAAA
AACGGCATCG CCGAACTCGA ATACCACGCC GAGGTGATGG CGATGCTGGG CTACGGCTCC
GGCTGGCACC CGCATGGCGC CCACGTGAAC ATCCATATCG GCGGGCGCGA GCCCGGCATC
GAGGGCTTTC GCGAGAGTCT GTCGCTGATC TCGGAGACGG CGCGCAACCT GCTCACCGTC
GAGAACGACG AGTCACTGTT CGGCCTCGAC GCGGTGCTGC GGCTCGGCGA CCGGGTGCCG
GTGGTGCTCG ATCTCCACCA TCATTGGGTC GAGAGCCGCG GCGTCTATAT CGAGCCCGAC
GATCCCCGCA TCCCGGCGGT GATCGCCTCC TGGCGCGGGG TGCGGCCGGT GAGCCATATC
AGTGTTTCAC GGGAAACGGT CCTGCCCGAG CACGATACCG GCACGCTGCC GGACTATGCG
GCCCTGTCCG AACAGGGGCA TTCCTGGCGT GATCTGGCCG CCCATTCCGA CCTGATGTGG
AATGAGGCGG TCAACGCGCT CGTCGCCCGG CACCTCGCTT GGACCGATTT CGAGATCGAG
GCCAAGGGCA AGAACCAAGC GAGCGTGCCG CTCGCCGCCC AGATCGGCCG CGAATTCTCG
CAGGCTGCCG CGTGA
 
Protein sequence
MSRKPNPSQP NTAEPPRLGF CCTFIPDPDP AHKTLKAAKD AAKLMNLGTV TMAHLERLGP 
TARFEKLEGV VRHNLAALER QIAWVSARPP LERLLRMASS VLPGYTHPVA EPLYAQAPMR
ALIEAGLARI GEQARAGDVR LSMHPGPFCI IASRNPNAQK NGIAELEYHA EVMAMLGYGS
GWHPHGAHVN IHIGGREPGI EGFRESLSLI SETARNLLTV ENDESLFGLD AVLRLGDRVP
VVLDLHHHWV ESRGVYIEPD DPRIPAVIAS WRGVRPVSHI SVSRETVLPE HDTGTLPDYA
ALSEQGHSWR DLAAHSDLMW NEAVNALVAR HLAWTDFEIE AKGKNQASVP LAAQIGREFS
QAAA