Gene Mchl_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1662 
Symbol 
ID7116807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1709961 
End bp1710686 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content69% 
IMG OID643524426 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionYP_002420453 
Protein GI218529637 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.964618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.892075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG CCTTCGACGC GGCCTCGGCC GCCTCCGAAA CGAAACGCGC CGAGGAGCCG 
CGGATTCCGG GCCTGCTCGG CATGATCGAG CGGACCACGC GCCGGCTCAA CCACGTCATC
CTGGTGTGCG GCGGGGTGGC GCTCGTCGCC GCCTGCCTCG TGCTCAGCTA CTCCGTCCTG
ACCCGCTACG TCTTCCACGA GCCGACCGAG TGGCAGGACG AGACCGCCGT GTTCCTCATC
GTCGGCGCGA CCTTCCTGTC GGCGGCGGGC GTCCAGGCCA AGCGCGGCCA CGTCGCCATC
GAGGCCCTCA CCGGCCTGCT GTCGCCGGGC GTCAACCGGG TGCGGCTGAT CTTCGTCGAC
ATCGTCAGCC TCGCCTTCGT GACCTTCTTC GCCTGGAAGA GCTGGAGCCT GTTCCACGAG
GCCTGGGAAG ACGGCCAGAT CTCGCAATCG ACCTGGGGGC CGCCGCTCTG GATTCCCTAC
CTGCTGATGG CCGCGGGCAT GAGCCTGCTC GCCGTCCAGT TCGTCCTGCA GATCACTGAG
GCCGTCCTCT ACGGCCCCCG CGCCGCCGGC TGGGCCAAGC CAAAGATCGG CATCGGAGCG
GACGTCAACC GCGACATGCG CGACCGCCCG GATCTGACGC CCGAGGGGCC GGATCCTCTG
GAGAGCACGA TCAAACCGAC AGCGGCCCCG GTTCGGCCGA TCACGACGAG GGGAGGCAAG
GCATGA
 
Protein sequence
MSHAFDAASA ASETKRAEEP RIPGLLGMIE RTTRRLNHVI LVCGGVALVA ACLVLSYSVL 
TRYVFHEPTE WQDETAVFLI VGATFLSAAG VQAKRGHVAI EALTGLLSPG VNRVRLIFVD
IVSLAFVTFF AWKSWSLFHE AWEDGQISQS TWGPPLWIPY LLMAAGMSLL AVQFVLQITE
AVLYGPRAAG WAKPKIGIGA DVNRDMRDRP DLTPEGPDPL ESTIKPTAAP VRPITTRGGK
A