Gene Mchl_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1659 
Symbol 
ID7116804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1706530 
End bp1708002 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content71% 
IMG OID643524423 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_002420450 
Protein GI218529634 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.952267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCGCC GCTCCCTTCC AGGCGCCCTT CCGGTCGCGC TCGCCCTGAC GACCCTCGCC 
GGATCGCCCG CCCTGGCCCA GCCCACCGGA CGGCCGGTCT ATGAGGGTGC GGGCGGCGAT
CCGCGGATCG CGGTGGCCCA GCCGGAATCG ACGAGCCAAG CGTCCGGCGG CTACGTGCGC
TCGATCGAGC CCTCGCTCGG GCCCTTCGGT GACCCGCTCG GCCTGCGGCC CCTGCTGAAG
GAGCGGGGCA TCGAGTACAG CCTCACCTAC ATCGCCGAGA CGCTGGGCAA TCCCGTCGGC
GGCATTCGCC AGGGGGCGAT CGTCGAGGAT CGGCTGAATC TGCGGCTCAA TCTCGACCTG
CAACGGCTGG CCGGCTGGGA CGGCGCCACG GTGCATGCCA ACGCCTACTT CATCCACGGC
ACCGGCCTGT CGCGCTACGA TGTCGGCAAC CTGCTGGCCG CCAGCGTGAT CGAGGCGCTG
CCCGCCTCCC GCCTCTACAC GCTGTGGCTC GACCAGCAGC TCTTCGACGG CAAACTCGGC
ATCCGGATCG GGCAGCAGGC GGCCGACACC GAGTTCTTCG TTAGCCAGAC CGCGACCCTG
TTCGTGAACT CGACCTTCGG CTGGCCGGCG ATCACCGCGC TCGACCTGCC GAGCGGCGGC
CCGGCCTACC CGCTCGCGAC GCCCGCGATC CGGGCCAAAT ACGTGCCGGG CAACGGCTTC
TCCCTCCAAG CCGGGCTCTA TGACGGCGAT CCGGCCGGGG CTAATCGCCC GGGCGACGAC
CCCGAGGGGC AGCGCCTCGA CCGCACCGGC ACCAATTTCC GCACCCGCGA TCCCGCCCTC
GTCGTGGCCG AGGCAACCTA CGCCTTCAAC ACGCAGGAGG GTTCGAAGGA ACTGCCCGGC
GACATCACCC TCGGGGGCTG GCAGCATTTC GGGCGCTTCG AGAGCTTGCG CTTCGACCAG
ACCGGCCTGC CGCTCGCCGA CCCGAACTCC ACCGGCATCG GCCGGCGCCT GCGCGGCAAT
GCCGGGATCT ACGCGGTCTA CGATCAGACG CTCTACTGGG AATCGGGCAA GGACGACGAG
GGCCTCGGCT TCTTCCTGCG CGCGGCGTGG TCGCCGACCC GTTCCAGCCT CGTCTCCGCC
TATCTCGATA CCGGCCTCGC CTATAAGGGC CTGTTGCCGG GCCGCGACAA CGACACGGTG
GGCGTCAGCC TGGCGCAGGC CCGCCTCTCC GACGACGCGC GCCGCTCCGA CATCGACACC
ATCGTCCTGA CCGGCACGCC GATGCCGCGG CGGCGGGCCG AGACGGTGAT CGAGGCGACC
TATCAGGCGG TGGTGGTGCC GGGCTTCACC GTCCAGCCGG ACGCGCAACT GATCCTGCAT
CCCGGCGGCG GCATCGCCAA TCCGCGCGAC CCGGAAGGCC GCCGGGTGCG CAACGCCGCC
GTGCTGGGGC TTCGCGCGAC GGTTCAGTAT TGA
 
Protein sequence
MSRRSLPGAL PVALALTTLA GSPALAQPTG RPVYEGAGGD PRIAVAQPES TSQASGGYVR 
SIEPSLGPFG DPLGLRPLLK ERGIEYSLTY IAETLGNPVG GIRQGAIVED RLNLRLNLDL
QRLAGWDGAT VHANAYFIHG TGLSRYDVGN LLAASVIEAL PASRLYTLWL DQQLFDGKLG
IRIGQQAADT EFFVSQTATL FVNSTFGWPA ITALDLPSGG PAYPLATPAI RAKYVPGNGF
SLQAGLYDGD PAGANRPGDD PEGQRLDRTG TNFRTRDPAL VVAEATYAFN TQEGSKELPG
DITLGGWQHF GRFESLRFDQ TGLPLADPNS TGIGRRLRGN AGIYAVYDQT LYWESGKDDE
GLGFFLRAAW SPTRSSLVSA YLDTGLAYKG LLPGRDNDTV GVSLAQARLS DDARRSDIDT
IVLTGTPMPR RRAETVIEAT YQAVVVPGFT VQPDAQLILH PGGGIANPRD PEGRRVRNAA
VLGLRATVQY