Gene Mchl_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1657 
Symbol 
ID7116802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1702140 
End bp1704287 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content68% 
IMG OID643524421 
ProductTonB-dependent receptor 
Protein accessionYP_002420448 
Protein GI218529632 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.818594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTCC GTCACCGGGC CGTGCCGCGT GCCGCCCTGC CCTCGACCCT GCTCGTCTCC 
GGCCTCGTCC TGTCCGCCCC CGTCCTTGCG CAGGCGCCTC CGGAGAGCGC GGCACTTTCG
GAAATCAGCG TCTCCGCTTC ACCCGCCACG GGGCGCCCCG CCGGCCCGGC CGAGACCGCC
GGCTCGCTCA CGGTGCCGAG CGTGGCTGCG CAGCGGGCGG CGGTGAACGC CACCGTCGGC
TCGGTCGCCT TCGTCGATGC CGCGACGTTC CAGAACCGCT ACGCCAACAC CGTGCGCGAC
GTGCTGAAAG ACGTGCCCGG CGTGTTCGTG CAGGAGCGCT ACGGCCAGGA GATGCGCCTC
TCGATCCGCG GCTCCGGCAT CGCCCGCGGC TTTCATGTCC GCGGCATCGA ACTCCTGCAG
GACGGCATTC CGCTCAACCT CGCCGACGGC AGCGGCGACT TCTACCAGAT CGATCCGCTG
AGCCTGCGCT CGGCCGAGGT CTACAAGGGC GGCAACGCGC TGACCTTCGG TGCGACCACG
CTCGGCGGCG CAGTGAACTT CGTGACGCCG ACCGCCTACA CGGCGCTCAG CCCGAACAGC
GTTCGGATCG ATGGCGGCAG CTTCAACACG ATCCGCGAGC ATTTCCAGCT CTCGCGGATC
TCAGGGCCGG CCGATGTCCT GATCTCCGGC ACCGCGACCA ATTCCGACGG ATTCCGCGAT
CACGAGACCC AGCGCACCCG CAACGTGAAC GCCAATCTCG GCTACCGCCT CGCGCCGGGC
GTCGAGACGC GGTTCTTCCT CGGCTTCTAC GACACCGACC AGAAGCTGCC CGGCTCGCTC
TCGCTGTTCG ACGCGCTGAA CAATCCGCGC CTCGCCAACC CGGCAGCCCT TGCCGGCAAC
CAATCGCGAA AAGTGACGAC GGAGCGCATC GCCAACCGCA CCTCGTTCGA ACTGGAGGTC
GGGCGCCTCG ACATCGATTC CTGGGCGATT CACAAGAACC TCTACCATCC GATCTTCCAG
GTGATCGACC AGGACGGCTG GACCTACGGC GTCGCGCCGC GCTGGGCCGG CACCTTCGAT
CTCGGCGGCT TCCGCAACGA CCTGATCCTC GGCCTGCGGG CTTTCGCCGG CATCAACGAC
GCCCGGCAGT TCGTGAACGT AGCGGGGTTC CGCGGTGCCC AGACGCTCGA TGCCCGCCAG
AGCGCCTCGA ACTACGAGGC CTATGCCGAG AACCGGTTCT GGTTCCGCCC CGACATGGCG
CTGATGACCG GCGCCAAGCT GTTCTCCGCG AACCGCACCT TCAGCGACAA GGGCGGCCTG
CCGGCGAGCC CCGCCGCGCG CTTTGCCAAT GTCACCTACG AGGGCATCAA CCCGAAGCTC
GGCCTGCTGT GGCAGCCGCT GCCGGAGATT CAGGTGTTTG CCGACATCAC CCGCTCGCGC
GACGTGCCGG ATTTCTCCGA CCTCGTGCAG GCGAACCTGC TCGGCACCAC CTTCGTGCCG
CTCGAAGCCC AGCGCGCCTG GACCTACGAG GCGGGCTCAC GCGGCCGGAT CGATCGCCTC
TCCTGGGACG TGACGCTCTA CCGGGCGGAA GTCCGCGATG CGCTCATCAA CTTCACGCCC
AATCCGGGCT TGAACATCCC GGCGGCGACC TTCAACGCGC CGCGCACCCG CCACCAGGGC
GTCGAGGCCG CCGTGACCCT CGATCTCGCC ACCGACCTCA CCGGCGTCGG CGATCGGCTC
GCCGTGACGC AGATCTGGAC CCATAACGAC TTCCGCTTCG TCGCCGACCC GGTCTTCGGC
AACAACCGCA TCGCCGGCGT GCCGGTGAAC GTGCTGCGCA CGGTGCTCGG CTACCGCCAT
CCGAGCGGCT TCCATCTCGC CCCGACCCTC GACTGGGTGC CGCAGGGCGC CTTCGCCGAC
CACGCCAACA CCCTCAAAGT GCCGGGCTAT GCCCTGCTCG GCCTCCAAGC CGGCATCGAC
TTTGCCAACG GCGTCTCGCT GTTCGTGGAT GCCCGCAATC TGACGGACGA ACGCTACGTC
TCCGACATCT CAACGGTGAC CAACGCCGCG ACCGTGGCGG GCGGGCCGGT GGCGTTCTTT
CCGGGCAACG GCCGCAGCGT GTTCGGTGGC GTAAGGGCCT CGTTCTGA
 
Protein sequence
MPFRHRAVPR AALPSTLLVS GLVLSAPVLA QAPPESAALS EISVSASPAT GRPAGPAETA 
GSLTVPSVAA QRAAVNATVG SVAFVDAATF QNRYANTVRD VLKDVPGVFV QERYGQEMRL
SIRGSGIARG FHVRGIELLQ DGIPLNLADG SGDFYQIDPL SLRSAEVYKG GNALTFGATT
LGGAVNFVTP TAYTALSPNS VRIDGGSFNT IREHFQLSRI SGPADVLISG TATNSDGFRD
HETQRTRNVN ANLGYRLAPG VETRFFLGFY DTDQKLPGSL SLFDALNNPR LANPAALAGN
QSRKVTTERI ANRTSFELEV GRLDIDSWAI HKNLYHPIFQ VIDQDGWTYG VAPRWAGTFD
LGGFRNDLIL GLRAFAGIND ARQFVNVAGF RGAQTLDARQ SASNYEAYAE NRFWFRPDMA
LMTGAKLFSA NRTFSDKGGL PASPAARFAN VTYEGINPKL GLLWQPLPEI QVFADITRSR
DVPDFSDLVQ ANLLGTTFVP LEAQRAWTYE AGSRGRIDRL SWDVTLYRAE VRDALINFTP
NPGLNIPAAT FNAPRTRHQG VEAAVTLDLA TDLTGVGDRL AVTQIWTHND FRFVADPVFG
NNRIAGVPVN VLRTVLGYRH PSGFHLAPTL DWVPQGAFAD HANTLKVPGY ALLGLQAGID
FANGVSLFVD ARNLTDERYV SDISTVTNAA TVAGGPVAFF PGNGRSVFGG VRASF