| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1650 |
|---|
| Symbol | |
|---|
| ID | 7116794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1696395 |
|---|
| End bp | 1696958 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643524414 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_002420441 |
|---|
| Protein GI | 218529625 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00656272 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGA AACGCTCCGA AATCGTCGAC CTGCTGGTGC CCCTGCGGCG CTACGCCCGG
TCGCTCACGC GGGATTCGCT GAAAGCGGAT GACCTCGTGC ACGATACCAT GGTTCGCGCC
CTCGAATCGC GCGCGAACCT GAGGCCGGAC ACCAACCTGC GCACCTGGAT GATGACGGTG
CTGCACAACG TCTTCATCGA TGAGCAGCGC CGCAAACGCG TCGAGGCACG CCACGCCGAT
GTGCTGGTGC AGCTCTCCGA CGACGTGGCA CCGCCCGCCC AAGAGGGGCA GGTACGGCTC
ATGCAGATCC GCAAGGCGTT CGAAGGACTG CCCGAGGAGC AGCGCGCCGC GCTCCACCTC
GTGACGCTCG AAGGCATGGC TTATGCCGAC GCCGCGGCCG TGCTCGGAAT CCCGATCGGA
ACCCTGATGT CGCGGCTCGG CCGCGGCCGG GCGGCCCTGC GCGCCTTCGA GGAAGGCGGC
CGCAAGGGCA AGGCTAACGC CGGATCTTCC GACGATGGCC CCGACCGTGG CCGTGCACAT
CTACGCGTCG TTGGTGGGAA TTGA
|
|---|
| Protein sequence | MRSKRSEIVD LLVPLRRYAR SLTRDSLKAD DLVHDTMVRA LESRANLRPD TNLRTWMMTV
LHNVFIDEQR RKRVEARHAD VLVQLSDDVA PPAQEGQVRL MQIRKAFEGL PEEQRAALHL
VTLEGMAYAD AAAVLGIPIG TLMSRLGRGR AALRAFEEGG RKGKANAGSS DDGPDRGRAH
LRVVGGN
|
|---|
| |