| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1560 |
|---|
| Symbol | |
|---|
| ID | 7115170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1615449 |
|---|
| End bp | 1617038 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643524319 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_002420353 |
|---|
| Protein GI | 218529537 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0517929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC CGCTGCTCGT CGATCTGTCG CGCCTGCAAT TCGCGCTGAC GGCGATGTAC
CACTTTCTGT TCGTGCCGCT GACGCTCGGA CTTTCGATCC TCGTCGCCAT GATGGAGACG
GTCTACGTCA TGACGCGCCG CAAGATCTGG CGCGACATGA CCAAGTTCTG GGGCCTCCTG
TTCGGGATCA ACTTCGCGCT GGGCGTCGCC ACCGGCCTGA CCATGGAGTT CCAGTTCGGG
ATGAACTGGG CCTACTACTC GCACTATGTC GGCGACGTGT TCGGGGCCCC GCTCGCCATC
GAGGGCCTGA TGGCCTTCTT CCTCGAGGCG ACCTTCGTCG GGCTGTTCTT CTTCGGCTGG
GACAAGCTCT CGGCACTCGC CCACTGCGTC GTCACGTGGC TGATGGCGCT GGGCACCAAC
TTCTCGGCGC TCTGGATCCT GATCGCCAAC GGCTGGATGC AGAATCCGGT CGGCTCCCTG
TTCAACCCCG ACACGATGCG CATGGAGGTG ACCGACTTTG CCGCCGTGAT CTTCAATCCG
GTGGCGCAGG CGAAGTTCGT CCACACGGTC TCGGCGGGCT ATGTCTGCGG CGCGGTGTTC
GTGCTCGGCG TCTCCGCCTT CTACATCCTG CGCGGGCGGC ATCTCGAACT CGCCAAGCGC
TCGTTTGCCA TCGCGGCGGC CTTCGGCCTC GCCTCGGCGC TGAGCGTCGT CGTGCTCGGC
GACGAGAGCG GCTACGCCGT CACCGACCAC CAGAAGATGA AGCTCGCCGC CATGGAGGCG
ATGTGGCACA CGGAGCCCGC TCCGGCCGCC TTCACCGCGA TCGGCGTCCC GGATCTGGAG
AACCGCACCA CCCGCTACGC GCTCCACATC CCCTATGCGA TGGGCCTGAT CGGCACCCGC
TCGCTGACGA CCGAGATCCC CGGCATCACC GAACTGGTCG GGCACGCCAA GGACCGCATC
CGCAACGGGC TCGTCGCCTA TTCCGCGCTG GAGCGGATCA AGGCCGACCG CACGGATGAG
GCGGCCCGCA CCGAGTTCGC CCGGACGCAA CAGGATCTCG GCTACGCGCA GCTCCTCAAG
CCGCTGATCG GCGATCCGCT GAAGGCGACC GAGGCGGATA TCGACCGGGC GGCGTGGTCC
ACCGTGCCGC ACGTGCCCTC GCTGTTCTTC ACCTTCCGGG CGATGGTGGC CTGCGGCTTC
CTGCTGATCG CCCTGTTCGG GGCGGCGCTC TGGTACACCG CCCGCGAGGC CGAGGCGCCG
CGCTGGCTGT TCCGGGCCGC GCTCCTCGCC CTGCCGCTGC CCTGGATCGC GATCGAGTTC
GGCTGGTTCG TCGCCGAGTT CGGCCGCCAG CCCTGGATCA TCGAGGGCGT GCTGCCGACC
GCGCTCGCCA CCTCCGAACT CGGCATCCCC TCGCTCCTCA TCACCATCGC CGGCTTCACT
CTCGTCTACG GCGTGCTCGC GGTGATCGAG GTGCAGCTGA TGCTGCGCGC CATCGCCAAG
GGGCCTGAGA CCCTGGCCGA AGACCCGGCC GCCCTCTTCC CCGGCGCCGG CGCGAACCGG
AACGCCGCCG GCCTCGTCGC CGCCGAATAG
|
|---|
| Protein sequence | MTDPLLVDLS RLQFALTAMY HFLFVPLTLG LSILVAMMET VYVMTRRKIW RDMTKFWGLL
FGINFALGVA TGLTMEFQFG MNWAYYSHYV GDVFGAPLAI EGLMAFFLEA TFVGLFFFGW
DKLSALAHCV VTWLMALGTN FSALWILIAN GWMQNPVGSL FNPDTMRMEV TDFAAVIFNP
VAQAKFVHTV SAGYVCGAVF VLGVSAFYIL RGRHLELAKR SFAIAAAFGL ASALSVVVLG
DESGYAVTDH QKMKLAAMEA MWHTEPAPAA FTAIGVPDLE NRTTRYALHI PYAMGLIGTR
SLTTEIPGIT ELVGHAKDRI RNGLVAYSAL ERIKADRTDE AARTEFARTQ QDLGYAQLLK
PLIGDPLKAT EADIDRAAWS TVPHVPSLFF TFRAMVACGF LLIALFGAAL WYTAREAEAP
RWLFRAALLA LPLPWIAIEF GWFVAEFGRQ PWIIEGVLPT ALATSELGIP SLLITIAGFT
LVYGVLAVIE VQLMLRAIAK GPETLAEDPA ALFPGAGANR NAAGLVAAE
|
|---|
| |