Gene Mchl_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1504 
Symbol 
ID7115114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1558379 
End bp1559500 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID643524269 
Producturea ABC transporter, permease protein UrtC 
Protein accessionYP_002420303 
Protein GI218529487 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC GCAACCTCTA CCACAGCAAG CCAGCGCAAT GGGCGGTCTA CGGACTGTTC 
TTCGCGAGCA TTGCCCTGAT CCCGGCCTTC GTCTCCGACG GCTTCCTGCT CAACCAGTTC
GCCGTCTACG GCATCTACGG AATGCTCGCC CTCTCGATCA GCCTGTGCTG GGGCTTCGGC
GGCATCCTCA ATCTCGGCCA GGGCATCGCC TTCGGGCTCG CTGCCTACGG CATGGCCATG
ACCATGCAGA TGCAGTCGCA GGATCCGGAG TCGAACCCGA TCCCGCCGTT CATGCTCAAC
AACAGCCTGG AGCACCTGCC GTGGTTCTGG CAGCCGTTCT GGAGCACCGG TGGCGGCATC
CTGCTGGCGC TGATCGTGCC GACCTTGTTC TACGTCGTGT TCGGCACGCT GATGTTCCGC
GCCCGGGTCT CGGGGCCGTT CTTCGCGATC ATGTCGCTGG CGATGCTCTC GGCTTTCGCC
ACGCTGATCC TCGACATGCA GCCCTACACC AACGGCGCCA ACGGCATCTC GCCGCCCGCA
CCACTCAGCA TGTTCGGCGC CGATATCGAT CCCTACGGCC CCGCCGCCTA CTGGATCGTC
TGCGGGCTGC TCATCGCCGT CACGGTCGGC GCCAAGCTGC TGACGCAGAG CAAGTTCGGC
CTCGTGGTCC AGGCCCTGCG CGGCGACCCC GAGCGGGTGC GCTTCCTCGG CTACAACGTC
GCCCTCTACG AGACCGTGAT CTACGCGATC TCCGGCTTCA TCGCCGCGTT GGCCGGCTGC
CTCTGGGTAA TGCTGATCCA GTACGTCTCG CCGGCCCAGC TCGACACCAC CTTCAGCATC
GGCATGGTGA TCTGGGCCGG GATCGGCGGG CGCCTCTCGC TGCTCGGGGC GATCCTCGGC
GCCTTCCTGA TCCAGGGCGG CCAGAGCTAT CTCGGCGACC AGTTCCTCGC GACCTGGCTG
CTGATGCTCG GCGCCTTCTT CATCGTGGTC GTGCGCTTCC TGCCCAAGGG ATTGGCGGGG
CTTCTCGAGA AGGTGCTCGG CGCGCTCGCC CGCCAGCCGG CCAAGCACGC GCGGCCCGAC
ATGCCGCACG CCATCTCCGG TGCCCCGGCG GCGGGCGAGT AA
 
Protein sequence
MTTRNLYHSK PAQWAVYGLF FASIALIPAF VSDGFLLNQF AVYGIYGMLA LSISLCWGFG 
GILNLGQGIA FGLAAYGMAM TMQMQSQDPE SNPIPPFMLN NSLEHLPWFW QPFWSTGGGI
LLALIVPTLF YVVFGTLMFR ARVSGPFFAI MSLAMLSAFA TLILDMQPYT NGANGISPPA
PLSMFGADID PYGPAAYWIV CGLLIAVTVG AKLLTQSKFG LVVQALRGDP ERVRFLGYNV
ALYETVIYAI SGFIAALAGC LWVMLIQYVS PAQLDTTFSI GMVIWAGIGG RLSLLGAILG
AFLIQGGQSY LGDQFLATWL LMLGAFFIVV VRFLPKGLAG LLEKVLGALA RQPAKHARPD
MPHAISGAPA AGE