Gene Mchl_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1400 
Symbol 
ID7116373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1444385 
End bp1445098 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID643524174 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002420209 
Protein GI218529393 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0577794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.435154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACGA TCGCCCTCGT CGACGACGAC CGCAACATCC TGACCTCCGT CTCGATCGCG 
CTGGAGACCG AGGGTTACCG CATCCAGACC TACACCGATG GCGCCTCGGC GCTGGACGGT
CTGCGTCACT CCCCGCCCGA TCTCGCCATC TTCGACATCA AGATGCCGCG CATGGACGGA
ATGGAGCTTC TCAGACGCCT GCGGCAGAAA TCGGACCTTC CCGTGATCTT TCTCACCTCG
AAGGACGAGG AGATCGACGA GCTGTTCGGT CTCAAGATGG GTGCGGACGA CTTCATCCAT
AAGCCGTTCT CACAGCGCCT GCTGGTCGAG CGGGTGAAGG CGGTGCTGCG CCGCTTCGCC
CCGAAGGACG CCACGCCGGG GGCGGCCGCC CGCGAGGCCG ACGCCGCCGC CCGCTCGCTC
GAGCGCGGCC AACTGATGAT GGACCCCGAG CGCCATACCT GCACCTGGAA GGGCGAGCCG
GTGACCCTCA CGGTCACCGA GTTCCTGATC CTCCAGGCGC TGGCCCAGCG CCCCGGCGTC
GTGAAGAGCC GCAACGCCCT GATGGATGCG GCCTACGACG ATCAGGTCTA CGTCGACGAC
CGCACCATCG ACAGCCACAT CAAGCGGCTG CGCAAGAAGT TCAAGGTGAC GGACCAGAGC
TTCGACATGA TCGAGACGCT CTACGGCGTC GGCTACCGGT TCAAGGAGGG TTGA
 
Protein sequence
MPTIALVDDD RNILTSVSIA LETEGYRIQT YTDGASALDG LRHSPPDLAI FDIKMPRMDG 
MELLRRLRQK SDLPVIFLTS KDEEIDELFG LKMGADDFIH KPFSQRLLVE RVKAVLRRFA
PKDATPGAAA READAAARSL ERGQLMMDPE RHTCTWKGEP VTLTVTEFLI LQALAQRPGV
VKSRNALMDA AYDDQVYVDD RTIDSHIKRL RKKFKVTDQS FDMIETLYGV GYRFKEG