Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1379 |
Symbol | |
ID | 7116352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 1425497 |
End bp | 1426180 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643524153 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002420188 |
Protein GI | 218529372 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.163127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC TCTCGATCAA GCCGATCGTT CCGGCGACGA GCCTGCGGAC GCTGGCCTAC GAGGCGCTGA AATCCGCGAT CACCAACATG GATATCTACG GCCAGACCGG GGATGTTCGG CTTGATGAGC GCGGCCTGTC GCAGACGCTC GGCGTGAGCC GCACGCCGAT CCGCGAGGCA CTGACGGTGC TGGAGCAGGA AGGCTTCGTG CGCAACGAGC CCCGGCGCGG CGTGTTCGTC GTCAAGAAGA CGAAGCGCGA GATCGTCGGC ATGATCCAGG CCTGGGCGGC GCTGGAGAGC ATGGCGGCGC GGCTCGCCTG CACCGCCGCC TCGGACGAGG ATCTGGCCTG CCTGCGCCGC TCCTTCCCGG AGTTTTTCGA CGGCCAGCCC TACGAGCATC TCGACGAGTA CTCGGAAGCC AATATCCGCT TCCACCAGAA GATCATTGCG CTCGGCCACA GCGCGGTGAT CACGGACCTG ACCAGCAACC TGCTGATGCA TGTGCGCGGC ATCCGCAACA CGGCGCTCCG CCAGGGCGAC CGCGCCTCGA AGTCGATCGA GGAGCACGTG CAGATCATCG AGGCGCTGGA GGCCCGCGAT GCGGATCGCG CCGAGCGCCT CGTGCGCGAC CACGGACTCG GCCTCGCCGA CCACGTCCAG CGCTACGGCG ACCACCTCGA CTGA
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Protein sequence | MENLSIKPIV PATSLRTLAY EALKSAITNM DIYGQTGDVR LDERGLSQTL GVSRTPIREA LTVLEQEGFV RNEPRRGVFV VKKTKREIVG MIQAWAALES MAARLACTAA SDEDLACLRR SFPEFFDGQP YEHLDEYSEA NIRFHQKIIA LGHSAVITDL TSNLLMHVRG IRNTALRQGD RASKSIEEHV QIIEALEARD ADRAERLVRD HGLGLADHVQ RYGDHLD
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