Gene Mchl_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1379 
Symbol 
ID7116352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1425497 
End bp1426180 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID643524153 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002420188 
Protein GI218529372 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.163127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC TCTCGATCAA GCCGATCGTT CCGGCGACGA GCCTGCGGAC GCTGGCCTAC 
GAGGCGCTGA AATCCGCGAT CACCAACATG GATATCTACG GCCAGACCGG GGATGTTCGG
CTTGATGAGC GCGGCCTGTC GCAGACGCTC GGCGTGAGCC GCACGCCGAT CCGCGAGGCA
CTGACGGTGC TGGAGCAGGA AGGCTTCGTG CGCAACGAGC CCCGGCGCGG CGTGTTCGTC
GTCAAGAAGA CGAAGCGCGA GATCGTCGGC ATGATCCAGG CCTGGGCGGC GCTGGAGAGC
ATGGCGGCGC GGCTCGCCTG CACCGCCGCC TCGGACGAGG ATCTGGCCTG CCTGCGCCGC
TCCTTCCCGG AGTTTTTCGA CGGCCAGCCC TACGAGCATC TCGACGAGTA CTCGGAAGCC
AATATCCGCT TCCACCAGAA GATCATTGCG CTCGGCCACA GCGCGGTGAT CACGGACCTG
ACCAGCAACC TGCTGATGCA TGTGCGCGGC ATCCGCAACA CGGCGCTCCG CCAGGGCGAC
CGCGCCTCGA AGTCGATCGA GGAGCACGTG CAGATCATCG AGGCGCTGGA GGCCCGCGAT
GCGGATCGCG CCGAGCGCCT CGTGCGCGAC CACGGACTCG GCCTCGCCGA CCACGTCCAG
CGCTACGGCG ACCACCTCGA CTGA
 
Protein sequence
MENLSIKPIV PATSLRTLAY EALKSAITNM DIYGQTGDVR LDERGLSQTL GVSRTPIREA 
LTVLEQEGFV RNEPRRGVFV VKKTKREIVG MIQAWAALES MAARLACTAA SDEDLACLRR
SFPEFFDGQP YEHLDEYSEA NIRFHQKIIA LGHSAVITDL TSNLLMHVRG IRNTALRQGD
RASKSIEEHV QIIEALEARD ADRAERLVRD HGLGLADHVQ RYGDHLD