Gene Mchl_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1340 
Symbol 
ID7116313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1379763 
End bp1380632 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID643524116 
Productporin 
Protein accessionYP_002420151 
Protein GI218529335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAATT CCCTGATCCT TGCCGGCCTC ACGGGCATTC TCCTGTCGGG CACGGCGCTC 
GCCGCCGACC TCCCGCGCCG CGCGGCTCCG CCGCCGGTGT TCCAGCCGGT GCCGGTGTTC
ACCTGGACGG GCTTCTACGC CGGTTTCAAC GCCGGTTACG GCTTCGGCAC CCAGGATGAC
CGCGTCCCGA CCGTGATCGG CGTCGGCCCG GCCTCCCTGC TCGTGCCCCC GGGCACCACC
GCCGTGGTCG CCTTCAGCAA CCGCGAGTCC AACGAAGGCT TCGTCGGCGG CGGTCAGATC
GGCTACAACT ACCAGTTCAC CCCGGGCTCC GGTGTCGTGA TCGGTGTCGA GGCCGACGCC
CAGTACGCCG ATTTCGGCCG TGACCGGAAC CGCTTCCTCT CGACCAGCCC GCTGGCCGCC
CAGCAGGTGT TCAACCCGGG TGGTTTGTCC GGCCTCGACT TCTTCGGCAC CGTCCGCGGT
CGTCTCGGCT ACGCCTTCGA CCGCACCCTC GTGTACGGCA CCGGCGGCTT CGCCTACGGC
TCCGGCGGCG GTCGTGAGTT CGGCACCGGC GTGTCGAGCA ACGACTTCCA GACCGGCTGG
GCCGCCGGTG GTGGTATCGA GTACGCTCTC CCGACCGACT CGTTCCTGAA CTTCTTCAAG
TCGTCGGCCG TGACGCTGAA GGTCGAAGGT CTGTACGTGA ACCTCGACCG CGGCACCGGC
GGCCGTGGCG CCTTCGCGAC GGACAACCAG GGCCGTACGG TCTCCATCGG CAGCCCGGGC
ACCGTGCTCG TCAGCGGTGG CCAGCAGGTC CGCGACACCG AGTTCGCCGT CGTCCGCGCC
GGCCTGAACT ACAAGTTCGG CTCGTACTAG
 
Protein sequence
MRNSLILAGL TGILLSGTAL AADLPRRAAP PPVFQPVPVF TWTGFYAGFN AGYGFGTQDD 
RVPTVIGVGP ASLLVPPGTT AVVAFSNRES NEGFVGGGQI GYNYQFTPGS GVVIGVEADA
QYADFGRDRN RFLSTSPLAA QQVFNPGGLS GLDFFGTVRG RLGYAFDRTL VYGTGGFAYG
SGGGREFGTG VSSNDFQTGW AAGGGIEYAL PTDSFLNFFK SSAVTLKVEG LYVNLDRGTG
GRGAFATDNQ GRTVSIGSPG TVLVSGGQQV RDTEFAVVRA GLNYKFGSY