Gene Mchl_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1318 
Symbol 
ID7115581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1349427 
End bp1350140 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID643524095 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002420130 
Protein GI218529314 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGACA TGCTGATTGC AAGCGGACTT GGTCCGGTTT GCTCGGATCC GGAAGGGAAA 
GCGGGAGCTG CCAGGCTACC CTTCGCGGTG CAGAAGCACA TCGGAGCTCA GTTGCAGGCG
ACTTATCTCG AAATCGTCGT TTCAGGTGCG CCGCAGCATT TGCTTGATCT CACGCGGGTT
CTGGAGAGTG CTCTCGCGCC CCTGGCGAGT GAGCGCGACG CAGCCTTTCG CGCGGGGCTC
ACGGCAGCAC TCCCGGCGCT GCAGGTGTTC GCGCAGTCGC TCGCTGGAAG TGCTGCACGG
GCCGATGATC TCGTGCAGGA GGCCGTGCTG AAAGCGTGGG CCAATCAGGA TCGGTTCGTG
CCAGGCACAA ATCTGAAAGC GTGGCTGTTC ACCATCCTCC GCAATCACTT TTACACCGAA
CGACGCAAGC ACAGGCGTGA GGTGGAGGAC GTGGACGGTG TCATGGCGGG CCAACTGGTT
GCGCTGGCGG CACAGGAGCA TGGCTCGGAC CTTCAGGTCG TCTTGTCCTA CATCGCGCGG
CTACCGGCCC CCCAACGCGA AGCGCTGCTT CTCGTCGGTG CGCAGGGCCT GACTTACGAA
GCGGCCGCGG AGGTCATGGG CTGCCAGACC GGCACGGTGA AGAGCCGGGT AAGCCGTGCT
CGCTCCTACT TGATGGAGCG GCTGAGCACG CCTTCCACCA AGGTGCCGGC CTGA
 
Protein sequence
MIDMLIASGL GPVCSDPEGK AGAARLPFAV QKHIGAQLQA TYLEIVVSGA PQHLLDLTRV 
LESALAPLAS ERDAAFRAGL TAALPALQVF AQSLAGSAAR ADDLVQEAVL KAWANQDRFV
PGTNLKAWLF TILRNHFYTE RRKHRREVED VDGVMAGQLV ALAAQEHGSD LQVVLSYIAR
LPAPQREALL LVGAQGLTYE AAAEVMGCQT GTVKSRVSRA RSYLMERLST PSTKVPA