Gene Mchl_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1266 
Symbol 
ID7115529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1287410 
End bp1288462 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content69% 
IMG OID643524045 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002420080 
Protein GI218529264 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.892328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA TCCGAAGGGC CCTGGTTGCG GGCGCGAATG GCATCATCGG CAAGGCGCTG 
ATGCAGGAAC TCGCGGCAGG GGACGGTTGG CACGCGCGCG CCCTCTCGCG TCGACCGCAC
GGATCGAGCG GGGACATCGC GGCGGATCTC ACCGATCCAC ACATGACCCG CGCCGCCCTC
GCGCAGGCCC GAGATACGAC GCACCTATTC TACGCCGCGC TCGCGCCGCA TCCGAGCCTC
GCCGAAGAGG ATCGGCTGAA CGGCGCGATG CTGCGCAACC TCCTCGACGG GCTGGACGCC
GTCGGCGCGC CGCTGGAGCG CGTGGTCCTG TATCAGGGCG CGAAGGTCTA TGGCGTCCAC
CTCGGGCCGG TTCCTGCACC GTTCTACGAG GACGAGAACC CGCGCCACAT CGGGCCGAAC
TTCTACTTCA CGCAGGAGGA CGTGTTGCGG CGTCGGGCGG AGCGCGGCGG TGCAGCGTGG
TCGATCCTGC GCCCCGACGT GGTGGTCGGC GACGCGGCCG GTAACGCCAT GAACATCGCC
ATGGTGATCG GCGCCTACGC CGCCCTGTGC CGTATGGAAG GGGCAGCGTT CCGTTTCCCT
GGTCCCACGC ACGTCTACGA GGGCGTGTTC GCCCAGGTAA CAGATGCCCG CGCCCTTGGC
CGGGCAAGCC TCTGGGCTGC GACGGCGGAC GCCGCGCGCG GCGAGGCCTT CAACTACGTA
CACGAGCCTT TCCGGTGGCG GCGGGTCTGG GAGAAGCTCG CCGCCTCGCT CGATCTGCCG
CTCGGGCCGC CGGTTCCCAT GCGCCTCGCC ACCCACATGG CGGACAAGAA GCCGGCCTGG
GAGAAGCTGG TGGCCGAACA GGGCTTGAGC GACATGCCCT ACGAGCGTGC GGTCGGCTGG
GGCTTCGGCG ACTTCGTGTT TCACAGCGAC TTCGACCTCG TCTCCGACAT GGGCAAGATC
CGGCGCGCTG GGTTCGGCGA GAGTGTCGAC AGCGTCGAAG CTCTGGTGTC CGCCATTCGC
AGCCTACAGG AGGCAAAGGT GCTGCCGCGC TAG
 
Protein sequence
MAEIRRALVA GANGIIGKAL MQELAAGDGW HARALSRRPH GSSGDIAADL TDPHMTRAAL 
AQARDTTHLF YAALAPHPSL AEEDRLNGAM LRNLLDGLDA VGAPLERVVL YQGAKVYGVH
LGPVPAPFYE DENPRHIGPN FYFTQEDVLR RRAERGGAAW SILRPDVVVG DAAGNAMNIA
MVIGAYAALC RMEGAAFRFP GPTHVYEGVF AQVTDARALG RASLWAATAD AARGEAFNYV
HEPFRWRRVW EKLAASLDLP LGPPVPMRLA THMADKKPAW EKLVAEQGLS DMPYERAVGW
GFGDFVFHSD FDLVSDMGKI RRAGFGESVD SVEALVSAIR SLQEAKVLPR