Gene Mchl_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1193 
Symbol 
ID7117887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1206153 
End bp1206785 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID643523973 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_002420009 
Protein GI218529193 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTCCG CTGCGCGCAC TTCCGACGTT CTCACGATGC TTGCGAGCCA GGAGAGCGAG 
CGTCTGACCG TCGGCGACAT CATCGCCGTG CTGCGGGACC GCGCTTTCGC GCTGCTCGTG
GTTCTGCTCG GCCTGCCCAA CTGCCTGCCG ATGCCGCCGC CGATCCCGCT GGTCTGCGGT
CTGGTCCTGC TCGTCATCGC CATTCAGATC GTGGCCGGCA TGTCCGCCCC ATGGCTGCCG
CGTCTGCTGC TCGACCAATC AATCGCCCGT GAAACCGTGG CGAAGGCGGT GAAGCGGGCG
GTGCCTCTGC TGCGCCGGCT GGAGCGCTGG TCGCGCCCGC GTCTGAGCGT GTTCGACGGT
GCCGTCGGCA TGCGCGGCAT GGGCGTGCTG ATCCTGGCGC TGGCGCTGGC GCTCATCGTT
GCCCCGCCCT TCTTCGGCCA GATCCCGCTC GGACTCGCGG TCTCGCTGAT CGGCCTCGGA
CTGGTGGAGC GCGACGGGTT CGTGGTGCTG ATCGGCCTGT TGATCGGCGG CGTCGGCGTC
GGGATCTCGA TCGGCTTCGT CTACACCCTG TTCGCCAGCA TCATGGGCGC CTTCGCTTGG
CTCTCGCAGG CGATCCCCGG CCTCGGGCTG TAG
 
Protein sequence
MSSAARTSDV LTMLASQESE RLTVGDIIAV LRDRAFALLV VLLGLPNCLP MPPPIPLVCG 
LVLLVIAIQI VAGMSAPWLP RLLLDQSIAR ETVAKAVKRA VPLLRRLERW SRPRLSVFDG
AVGMRGMGVL ILALALALIV APPFFGQIPL GLAVSLIGLG LVERDGFVVL IGLLIGGVGV
GISIGFVYTL FASIMGAFAW LSQAIPGLGL