| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1163 |
|---|
| Symbol | |
|---|
| ID | 7117286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1176064 |
|---|
| End bp | 1177155 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643523943 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002419979 |
|---|
| Protein GI | 218529163 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.562644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGACT TGTCGGTTCC CACCCTGCAA TTCACCGATT TCCTGGTGTT CGGCGCCTGC
GCCGCGATCT TCCTCTGCGC GTGGCTGCTG CACCGGCAGA AGACCTACTT CCTCTGTTTC
GGGGTAAGCT ACGCCGTCTG CGCGACCATG GCCGTGTGGT TCGTGGATTT CGGCTATTAC
GGCAGCATCT GGTCGCCGTT CGGCTGGTCG CTCGCCGGGG CGACCTTCTG GATCGGGCTC
CGGCTCTTCG ACGGACGCCC GGCGGTGACG GGGCCGATGA TCGGCCTGTT CCTGCTCCCC
ACGGCGACGC ATCTCGGGCT CACGCTCGCG GGCGGTAGCT CCGTCGCGGT CAATGCCGGC
AGCACGATCG CCTATGCCGT CCACGAGGCT GCGGCGGCCG TTTATGTCTT CCGAACCTCA
CCGCGGCGAT CCCCGCTGCG CCACCTGATC GCCGGGGCCC TCCTCGCGAT CGCGCTGGTG
ATCTGCCTGC CCCTGCTGCC GGTGTCCGAG GCGTCGATCC GCCTGTCCGT CATCGCCATC
TTCATCATCG ATCACGTCAC CTCCATCCTC CTGACCACGG CGATCCTCGC CCTGGAAGCG
GAGCGGGGCT ATGCCGCCGT CGCGCGGATG GCGCGGACGG ATGCGTTGAC GGGCGCGCTG
AACCGGCAGG GCCTCGCGGC CGAGACCGGC GGCGTGACCG AGGCCGGCAT CATCGTCGCG
GACCTCGATC ATTTCAAAGC GATCAACGAC CGGTTCGGGC ATGCCGCGGG CGACGCGGTG
CTGCGCGACT TCGCCGCGCG GGCGACCGCG CTCCTGCCCG AGGGCTGCCA TCTCGCGCGG
CTGGGCGGCG AGGAGTTCGG AATCGTGCTG CCGGGGCACG ATCACAACGC GACGACCTAT
CTCGCCGAAC GCCTGCGCCG CGCGGTCGGC GGCGCGCCGG TCTCCTGGAA AGGATCGGCG
GTTCCGATCA CGGTGAGCCT CGGCGTCGCG ATGCTCCGGA CCGGCGAGGC GTTGAACGAG
AGCCTGGAGC GCGCCGACAA GGCGCTCTAC GACGCCAAGA CCGACGGCCG GAACCGCGTC
CGAGTGGCGT AA
|
|---|
| Protein sequence | MTDLSVPTLQ FTDFLVFGAC AAIFLCAWLL HRQKTYFLCF GVSYAVCATM AVWFVDFGYY
GSIWSPFGWS LAGATFWIGL RLFDGRPAVT GPMIGLFLLP TATHLGLTLA GGSSVAVNAG
STIAYAVHEA AAAVYVFRTS PRRSPLRHLI AGALLAIALV ICLPLLPVSE ASIRLSVIAI
FIIDHVTSIL LTTAILALEA ERGYAAVARM ARTDALTGAL NRQGLAAETG GVTEAGIIVA
DLDHFKAIND RFGHAAGDAV LRDFAARATA LLPEGCHLAR LGGEEFGIVL PGHDHNATTY
LAERLRRAVG GAPVSWKGSA VPITVSLGVA MLRTGEALNE SLERADKALY DAKTDGRNRV
RVA
|
|---|
| |