| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1088 |
|---|
| Symbol | |
|---|
| ID | 7118591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1101432 |
|---|
| End bp | 1102391 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643523875 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_002419917 |
|---|
| Protein GI | 218529101 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGAT CGGGAATAGC AAAGAGTTCG GTCGCCGTGC TGGGTATCGA TCTCGGCAAA
AACAGCTGTA GCCTGGTTGG CTTCGACCCA GCCGGTACGG TGGTTCTGCG TCGTCGCGCA
CGGCGTGACA CGATCGTCGG CCTGACGGCC AAGCTGCCCG CTTGTGTCGT CGCGATGGAG
GCCTGCTGCG GCGCCCATCA CCTCGGGCGG CTGCTGGCCG CGCAGGGACA TACCATCCGA
CTGATGTCGC CCGAGTATGC CAAGGCGAAG AAGAACGACG ACCGCGATGC CGAGGCGATC
GCCGAGGCCG CCACACGTCC GACGATGCGC TTCGTGCCCC TCAAGGCGCC CGATCAACTC
GACATGCAGA GCCTGCACCG GGTCCGGTCT CGGCTGGTCA GCATGCGTAC CATGCTCATG
AACCAGCTCC GCGCGATCCT GCTGGAGCGC GGTCTCGTTT TCCCGCAAGG CCGCCGCAAG
TTCGAGACGG CGGTCGGCAT TCTCGTGACG GATCCCCAGG CGCAGATTGG CGCGCGTATC
CAAGCTCTTG TCGCCGAGAT CCGTGAGGAG TGGGCAAGCC TCGACGGCCG TATCGAAGCT
CTCGACCGAG AGTTCGTGGC GCATGCCCGC GCCGACGAGG CGGCACGTCG CCTGGTGTCT
ATCTCAGGCG TCGGGCCGAT GACGGCCACG GCCTTGCGCG CGGCCGTCGA CGACGGAAGC
GCCTTCGCGT CCGCGCGCGA CCTGCCGGCT TGGCTTGGCC TCGTGCCCCG ACAGCATACG
ACCGGCGGCA AGCCGAAGCT GCTCGGCATC AGCAAGAGGG GCAACGCCTA TCTGCGTGGG
CTCTTCATCC ATGGGGCGCG CGCAGCGCTG GCCTCGCTGT CCAAGGTCGA GGATGCGACC
GGCCGATGGC TGCGCAGTCT GCTGGAATGT ACACCTGTGG GCCCTAAAAT AGCTGTTTAA
|
|---|
| Protein sequence | MEGSGIAKSS VAVLGIDLGK NSCSLVGFDP AGTVVLRRRA RRDTIVGLTA KLPACVVAME
ACCGAHHLGR LLAAQGHTIR LMSPEYAKAK KNDDRDAEAI AEAATRPTMR FVPLKAPDQL
DMQSLHRVRS RLVSMRTMLM NQLRAILLER GLVFPQGRRK FETAVGILVT DPQAQIGARI
QALVAEIREE WASLDGRIEA LDREFVAHAR ADEAARRLVS ISGVGPMTAT ALRAAVDDGS
AFASARDLPA WLGLVPRQHT TGGKPKLLGI SKRGNAYLRG LFIHGARAAL ASLSKVEDAT
GRWLRSLLEC TPVGPKIAV
|
|---|
| |