Gene Mchl_1057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1057 
Symbol 
ID7118560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1072449 
End bp1073129 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content66% 
IMG OID643523848 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002419890 
Protein GI218529074 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.495081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG GAACTTCCCG GACAGCTCCG TCCCGCTCGC GCGAGGGCCG AATTCCCGAG 
GGCGCGCGCC AACACCTGGG CTCCGAGTTG CGTAGCTACT ACGCCTCCAT GCTGGCCGAG
GTGCAGCCAT CGACGCTGCT GGAACTGATC GCGCGGCTCG ACGGCGCTCC GTACGCCAGG
GAGGCTGCAG ACTTCCGAGA CAGGCTCCTC GCGTCTCTTC CGGGCCTGCG TGCCTTCGCG
CTGTCTCTTG CCGTGAACCA TGCTGTCGCC GACGACCTGG TGCAGGAGAC CTTGCTCAAG
GCGTGGAAGA ACCAGGACAG GTTCGAGCCT GGCAGCAACT TGCAGGCATG GCTCTGCACC
ATTCTGCGCA ACCAGTTCTA CACTGACATC CGCAAGCGGA AGCGCGAGGT CGAGGACGCC
GACGGGACCA TGGCCGGCCA AATGGTGGCA TCGGCTGCTC AAGAAGCCAA CAGCGAGCTG
CAGCAGGTCA AGCAGCACCT TGCTAAGCTG CCGGCGGCCA TGCGCGAGGC GCTGCTGCTT
GTGGGCGCCC AGGGCCTGAC CTACGAGGAC GCCGCCGAGC TCATCGGCTG CCAAGTCGGC
ACTGTGAAGA GCCGCGTGAG TCGGGCCCGT GCCCTTCTGG CAAGATCGCT GGGCATGGAC
ACGCGCAGCA CTGCGCTTTG A
 
Protein sequence
MAEGTSRTAP SRSREGRIPE GARQHLGSEL RSYYASMLAE VQPSTLLELI ARLDGAPYAR 
EAADFRDRLL ASLPGLRAFA LSLAVNHAVA DDLVQETLLK AWKNQDRFEP GSNLQAWLCT
ILRNQFYTDI RKRKREVEDA DGTMAGQMVA SAAQEANSEL QQVKQHLAKL PAAMREALLL
VGAQGLTYED AAELIGCQVG TVKSRVSRAR ALLARSLGMD TRSTAL