Gene Mchl_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1030 
Symbol 
ID7118533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1051139 
End bp1052746 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content68% 
IMG OID643523826 
Productouter membrane efflux protein 
Protein accessionYP_002419868 
Protein GI218529052 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCGCC CCTGTAACCG AACCTCGCCC GACAACGAAC CAACCCCCGA AGGGACGACA 
CCGATGATCC GGCATCAAAC TTCCGGTCCC GGCCCGCATC GGGGGGCGGC AGCACCGCTC
GGACGCCGTG CCAGGGCCGC CGCCGTCCTG GCGGCAGTCG GGCTCCCGCT TGGTGGCTGC
GTAGGCTTCT CGGCCGACGG CGGCCTCGGA CCGGCGCATA GCTACGCCGC CCTGGAGCTG
AAGAAGGACA TCGTAAAGGT GTCCGATGAG ACCGCCGCAA TAGGCGCGGC GGCTCGTGCG
GATCAATTGC TGCGGCGCCC GCTCACGCCC GATAGTGCGG TTCAGGTCGC CCTCTTGAAG
AACCGTGCCT TGCAGGCGTC CTTCAACGAC CTCGGCGTTT CGGAAGCCGA GTTCGTCCAG
GCGACCCTGC CGCCGGTACC GCGGGTGGCC CTCAGCCGGA CGGGGGGCGA CTTCACGCTG
GAGGTCGAGC GCTCGCTCAC CGCGAGCCTC ATCGAGCTCC TCACGCTGCC GGTCCGCATC
CCCGTCGCAC AGAACCGCTT CAGGGCGGAG CAATACCGCG CAGTGGGGCA GGTGCTGCGT
CTCGCCGGCG AGGCGCGGCG TCAGTTCTAC CGAACGGTGT CTGCCAACCA GTCTGTCGCC
TACCTGGAGC AGGCGCTCGC GAGCGCGGGC TCCGCCTCCA CTCTGGCCAA GCAGCTCGGC
GAGACGGGCG CCCTGAACAA GCTGGAGCAG GCGCGCGAGC ACGCCTTCTA CAGCGAACTC
GGGGCGCAGC TTGCCAAGGC ACGCGTGCTG CAGCGGGTCG AGCGCGAGAA GCTCGTCCGC
CTGCTCGGCC TCTGGGGGCG GGAAATCGAT TTCAAGCTCC CGAATGGCTT GCCCTCGCTG
CCCGGGCGGT TGGTGAGCGG CACCCAGATC GAGGCCGAGG CGATCAAGAA GCGCGCCGAC
ATCCAGACCG CGCGCTATGA ACTCCAGTCG CTCGCGGGCC AGTACGGCCT CAACCAAGTC
AGCGGCTTCA TCAACGTACT CGATGTCGGC TACTCCGACC GCTACGAGCG CTCGAAATCG
TTCGAGCCGA ACGAACAGGG TGGCTTCAGC GTCGCGCGGG AGAAGAGCTT CGGGCGCGGC
TACTCCCTCG ACCTCGTCAT CCCGATCTAC GACTTCGGGG CGACGGTGGT GCGCGGCGCG
CGGGAGGCCT ATCTCGGTGC CGCCCATCGC CTCGCGGAGA AGGCCGTCAA TGCCCGCTCT
GAGGTGCGCG AGGCCTATCA GCGCTACCGT GGCCAGTACG ACATCACCCG CCATTATCAG
GGCAGCGTGC TGCCCCTGCG CAAGACGATC CAAGACCAGG CGCTGCTGCA GTACAGCGGC
ATGCTGATCG ACGTTACCAC ATTGATCATC GACGCCCGCT CGCGGATCCT GAGCAACATC
CAGGCGATCG AGGCTCAACG CGATTTCTGG ATCGCAGCGA CCGACCTCAG GGCTGCCGTC
ATCGGCGGCG GCTTCACCGG CGAAGGGTTC GGAGGTGAAT CGGCCGGGTC CGAGGCGGTC
GCCGGCGGCG GAGGCGACAC CCTCGCGTCC GCCACGCCCG GCGGCTGA
 
Protein sequence
MGRPCNRTSP DNEPTPEGTT PMIRHQTSGP GPHRGAAAPL GRRARAAAVL AAVGLPLGGC 
VGFSADGGLG PAHSYAALEL KKDIVKVSDE TAAIGAAARA DQLLRRPLTP DSAVQVALLK
NRALQASFND LGVSEAEFVQ ATLPPVPRVA LSRTGGDFTL EVERSLTASL IELLTLPVRI
PVAQNRFRAE QYRAVGQVLR LAGEARRQFY RTVSANQSVA YLEQALASAG SASTLAKQLG
ETGALNKLEQ AREHAFYSEL GAQLAKARVL QRVEREKLVR LLGLWGREID FKLPNGLPSL
PGRLVSGTQI EAEAIKKRAD IQTARYELQS LAGQYGLNQV SGFINVLDVG YSDRYERSKS
FEPNEQGGFS VAREKSFGRG YSLDLVIPIY DFGATVVRGA REAYLGAAHR LAEKAVNARS
EVREAYQRYR GQYDITRHYQ GSVLPLRKTI QDQALLQYSG MLIDVTTLII DARSRILSNI
QAIEAQRDFW IAATDLRAAV IGGGFTGEGF GGESAGSEAV AGGGGDTLAS ATPGG