| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0979 |
|---|
| Symbol | |
|---|
| ID | 7114747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 998569 |
|---|
| End bp | 1000605 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643523781 |
|---|
| Product | Resolvase domain |
|---|
| Protein accession | YP_002419823 |
|---|
| Protein GI | 218529007 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.127172 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG ACATACTCCC TCGAGAGGGA TCTCCTCTCC AATTGTTGAT CCGCAATCGG
ATCGATCGCC GTACCGATCT GCCGGGGCCG ACTCAGCAGA CTCCGTCGGT CATAGCGTAC
TATCTACGTA GATCTTCCGC GGATCCCCTC TATTTCAGCA TCGCGGCGCA ACTGGCGCAC
TGCAACGCCC ACTCCCACTC GCTCGGAGGA GAGTTCGACC AGCAGCGTCT GCTTTTCGTG
GACCGCCACC GGTCCGGTGC CACGACGATC GGCCGCGAGG GTATCGCGGC GATGCTCGAA
GCCGCCCGCC AAGGCCGGTT CCGGATCCTC GTCGTACGCA GCATCTGCCG GCTTACGCGC
AACGCGACGG ATGCCGCGCG TCTGCACGAG CAACTGACCG GCTTGGGCGT GTCAATCCAC
GTGGCCGGCA GAGGACAAGT CCAGCAGTAC GAGATCATGC TCCTCGCCCT GTCGGCTCAG
CGCGAGCGCC TGCGCATGAT GGCTTCGCTG ATGGATGGCA AGCGAAGGGC TGCGGTCAGC
GGAGAGTTCT TCGGATCCTG GCCGACCTAC GGCTATGACC GCATCGACGG CCCCGACTGG
CGGAAGAACG TGAACCAGGC GGCGATCCTC GAGCGCTGCT TCAGGGAGGT GGATGCCGGA
CTCAACCTGC AGGATCTCGC GAAGCTTCTG AACGGCGAAT GCATCCCGGC CCGGAATGGC
GGAATCTGGA GACCGCGCCA CTTCTTCGCG CGCGGCCGGG GTTTGCTCGA CAGACCGATC
CTGAAAGGAG TGTTCGTCTG GAGTCTCTGG GGTGAGAAGC CGATCACCAT TTCGAGACCT
GATCTTGCAG TCATATCCGC GGATCTCTTC GACCGCGTCA ACGAGCGCTA CGGCGTGCCG
ACGCGGACAC AGGAACCCAG GACCAGGGCT CCGTTTCTTC TCGGCCTAGT GCGCTGTGCA
TGCGGCGACA GGATGCATCT CGCCGAAGAC GGGAACGCGA TGCACCTCCA CTGCCGAACC
GCTCAGATTG GCGGAGGATG CGATAGGACG AAGGGCTTCT CCACCAGCAT CGTGGCTCGG
CAGGTGCTCC ATCTGTTCCG ACACGAGATA CTCGACCCCG ACAGCGGACC CGAGCTGGAA
GAGGGCCGCC GGATCGAATG GCAGGGGTTG AACGCCACGG TGCAGGCCGA ACGCGACCGC
GTCTCGGCCC GTATCGAGCA GATCGCGCAC GAACTCGACG CCCTGTCGCA GGACGAGGAG
GAGATCGATC CCTACGCCGC CGCGGCGTGC TGCGAACTCG AACTCGAGCA TCACAAGCTT
TCGGAGAGAC TGACGCAGCT TGTCGTGCCT CCGTTCGGCG CCTTGGATTG GGAGCGGGTC
GACGTCGATC GGGCCCGGAT CCTCCGCGTT ATGGAGCGCC TGCCCTCGAT GTCCCGATCA
GGCGAAGACC TTCGCGTGAT CGAACTCGTG CGCAGCATTG TCAGCGAGAT CGAACTCGAC
ATCCGCGAGG ACGGCTACCA GCTCAGGGTG TGGTTCGGCG CGCCCGGTGC TCCGAAGGGC
TTCGATGCGG TCGATCGGCT GGCTGGTCGC TGGTGGATGC GCTGGTTCCC GATGCCGCCC
AAGGGACCTT TGCGGTATCC CGAGGTTGTG CTCGGGCACC AGAGACGGGC TGAGGCCGGC
ATGTTCCGCC TCGACGACGG CGACTGGGCG GCGGTCGAGC CAGTCATCCG CAACGCACCG
AGACTCGGCC CCCGCGACCG GACGATGGCC GAAGCCATCC TCTTCATCGG GATGACGGGC
CTTCCGGCGA AATACTTCCC GGAGCGCTAC GAGCCGTGTG CGCCGCTTCT GAAGCATGCG
CGCCCCGGAG CGGTGTGGCG CGGCATGTAC GAGGTCCTGC ACCAGCGGTG TTCGCCGGTC
GTGGCGGAGG CCGGGCCCGC CGCCCGCATC CTCCACGAGG ATCTGAATTC TCGGGCCCAC
GCCCATCCGG TGCCTCCTCT CGAGGATCCG AGCCCCTGGT GCAATCCGAA GGCCTGA
|
|---|
| Protein sequence | MPEDILPREG SPLQLLIRNR IDRRTDLPGP TQQTPSVIAY YLRRSSADPL YFSIAAQLAH
CNAHSHSLGG EFDQQRLLFV DRHRSGATTI GREGIAAMLE AARQGRFRIL VVRSICRLTR
NATDAARLHE QLTGLGVSIH VAGRGQVQQY EIMLLALSAQ RERLRMMASL MDGKRRAAVS
GEFFGSWPTY GYDRIDGPDW RKNVNQAAIL ERCFREVDAG LNLQDLAKLL NGECIPARNG
GIWRPRHFFA RGRGLLDRPI LKGVFVWSLW GEKPITISRP DLAVISADLF DRVNERYGVP
TRTQEPRTRA PFLLGLVRCA CGDRMHLAED GNAMHLHCRT AQIGGGCDRT KGFSTSIVAR
QVLHLFRHEI LDPDSGPELE EGRRIEWQGL NATVQAERDR VSARIEQIAH ELDALSQDEE
EIDPYAAAAC CELELEHHKL SERLTQLVVP PFGALDWERV DVDRARILRV MERLPSMSRS
GEDLRVIELV RSIVSEIELD IREDGYQLRV WFGAPGAPKG FDAVDRLAGR WWMRWFPMPP
KGPLRYPEVV LGHQRRAEAG MFRLDDGDWA AVEPVIRNAP RLGPRDRTMA EAILFIGMTG
LPAKYFPERY EPCAPLLKHA RPGAVWRGMY EVLHQRCSPV VAEAGPAARI LHEDLNSRAH
AHPVPPLEDP SPWCNPKA
|
|---|
| |