Gene Mchl_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0964 
Symbol 
ID7114731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp979137 
End bp980030 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID643523766 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_002419809 
Protein GI218528993 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.45833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG CTCTGCCCGT GCTCGCCAAT GAGGGAGGCC TTTCGCGCTA CCTCGATGAG 
ATCCGCAAGT TCCCGATGCT GGAGCCGGCG GAAGAGTTTA CCCTTGCCAA GAGCTGGCGC
GACGATGGTG ACCGCGAAGC CGCGCACCGC CTCGTGACTT CGCACCTGCG TCTCGTGGCC
AAGATCGCCA TGGGCTACCG CGGCTACGGC CTGCCGATCA GCGAAGTCGT GTCCGAGGGC
AATGTCGGCC TGATGCAGGC CGTGAAGCGC TTCGATCCGG ACAAGGGCTT CCGGCTGGCC
ACCTACGCGA TGTGGTGGAT CAAAGCGGCG ATCCAGGAAT ACATCCTGCG CTCGTGGTCG
CTCGTGAAGA TGGGGACCAC CGCCAACCAG AAGAAGCTGT TCTTCAACCT GCGCAAGGCG
AAGGGCCGCA TCTCGGCGCT CGACGAGGGC GATCTGCGCC CCGATCAGGT CCAGCACATC
GCCACCTCGC TCGGCGTGCC CGCGCAGGAC GTGATCGACA TGAACCGCCG CCTGTCCGGC
GATACCTCGC TCAACGCGCC CCTGCGCGAA GAGGGCGAGG GCGAATGGCA GGACTGGCTG
GTGGACAACA GCCCGAGCCA GGAGACCGTG CTCGCCCGCG AGGAGGAGGG GCGCAACCGC
CTCTCGGCCC TGCGCGACGC GCTCGGCGTG CTGAACCCGC GCGAGCGGCG CATCTTCGAG
GCACGGCGGT TGGCCGACGA CCCGATCACC CTCGAGGATC TCTCGGGCGA GTTCGGCGTC
TCGCGCGAGC GCGTCCGTCA GATCGAGGTG CGGGCCTTCG AGAAGGTGCA GGAGGCGGTC
AAGCGCAACC TCGCAACCCG CGAGCTGCCC CGGACCGAGG CGCGGGTCTC GTAG
 
Protein sequence
MAGALPVLAN EGGLSRYLDE IRKFPMLEPA EEFTLAKSWR DDGDREAAHR LVTSHLRLVA 
KIAMGYRGYG LPISEVVSEG NVGLMQAVKR FDPDKGFRLA TYAMWWIKAA IQEYILRSWS
LVKMGTTANQ KKLFFNLRKA KGRISALDEG DLRPDQVQHI ATSLGVPAQD VIDMNRRLSG
DTSLNAPLRE EGEGEWQDWL VDNSPSQETV LAREEEGRNR LSALRDALGV LNPRERRIFE
ARRLADDPIT LEDLSGEFGV SRERVRQIEV RAFEKVQEAV KRNLATRELP RTEARVS