Gene Mchl_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0960 
Symbol 
ID7114727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp974731 
End bp975588 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID643523762 
Productaminotransferase class IV 
Protein accessionYP_002419805 
Protein GI218528989 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.549008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CCGCCTACCT GAACGGCGAA TTCCTGCCCC TGGACGAAGC CCGCGTGCCG 
GTGATGGACC GCGGCTTCCT GTTCGCCGAC GGGATCTACG AGGTCGCCGC CGTGCTGCAC
GGCCGCCTCG TGGACAATGC CGGGCATCTC GCCCGGCTCG ACCGCTCACT CGCCGAGATC
GGCATCCGCA ATCCTCATAC GGCCGAGGAA TGGGAGCGGC TGGAGACGGA CCTCGTTGCG
AAGAACGGCG TGCGCGAGGG CCTCGTCTAT ATCCAGGTGA CGCGGGGCGT GGCCGAGCGC
GACTTCTCGT TTCCGAAGGG GGACGTGGCC CCGACCGTGC TGATGTTCAC GCAGGAGAAA
TCCATCGTGA ACAACCCGAT GGCCGAGACC GGCGCGCGGG CGATCACCGT GCCGGACCTG
CGCTGGAAGC GGCGGGACAT CAAATCGGTG GCGCTTCTGG CCCAGGTTCT CGCCAAGCAG
CAGGCCTCGG AGGCCGGCGT CGCCGAGGCT TTCATGGTCG AGGACGGCGT CGTGACGGAG
GGCTCGTCCT CCACCGTCTT CATCGTCACC AAGGGTGGCG CCCTGGTGAC GCGCCCGCTC
TCCCATGCGG TTCTGCCCGG CATCACCCGC AAGGCGGTGC TGGCGCTGGC GGACGAGACC
GGCCTCAGCT TCGAGGAGCG GCTCATCAAC GCCCGCGAGC TGCCCGAGGC GGCGGAAGCC
TTCTACACCT CGGCCTCGGC CTTCGTGATG CCGGTGGTGG AAATCGACGG CAAACCCCTC
GGCGACGGGC GGCCCGGCCC GGTGGCGCGG CGCCTGCGCG AGCTGTATTT TGCCTTTGCC
GAGCGATCCG AGTCTTAA
 
Protein sequence
MSRTAYLNGE FLPLDEARVP VMDRGFLFAD GIYEVAAVLH GRLVDNAGHL ARLDRSLAEI 
GIRNPHTAEE WERLETDLVA KNGVREGLVY IQVTRGVAER DFSFPKGDVA PTVLMFTQEK
SIVNNPMAET GARAITVPDL RWKRRDIKSV ALLAQVLAKQ QASEAGVAEA FMVEDGVVTE
GSSSTVFIVT KGGALVTRPL SHAVLPGITR KAVLALADET GLSFEERLIN ARELPEAAEA
FYTSASAFVM PVVEIDGKPL GDGRPGPVAR RLRELYFAFA ERSES