Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_0889 |
Symbol | |
ID | 7115966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 903291 |
End bp | 905588 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643523692 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_002419735 |
Protein GI | 218528919 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.53881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCCTGC CCCGCCTCAA GACGCTGACG ACGCGGATCA GCCGCGCGGC CCTGGCCTTC GATGCCTGGG TCAATGCGAG CCTGTACGAG GGCGGCCATT CCACGACGGA AGCCTACGAG CGCTTCCAGG CGCGGATGCA GGTCTTCTCG GTCCGCGGCT GGAAGCGCTA CGCCCTCGAC CTCACCAGCG AGGGTGTGAC CATCGGCACG GCGGGCGCCC TGCTGCTGCT GTTCCTGGCT CAGCCTGCCT TCAACCTCAC CAGCGACAAC TGGCTGAAGG CCCAGGATCT CGCCGTCACC TTCCTCGACC GCTACGGCAC CGAGGTCGGA CGCCGCGGCA TCAAGCACGA CGACTCGCTG AAGTTCGACG ACTTTCCCGA GCTGATGATC AAGGCGCTGC TCTCGACCGA GGACCGGCGC TTCTACGAGC ATTGGGGCAT CGATCCGATC GGCACCTCCC GCGCGCTCGT CTCGAATTCC TCCGGCAAGG GCAACGTGCA GGGTGGCTCC ACCCTGACGC AGCAGCTCGC CAAGAATTTG TTCCTGACCA ACGAGCGCTC GCTGGAGCGC AAGGTCAACG AGGCGTTCCT TGCCTTCTGG CTCGAAGCGC ACCTGACCAA GAACCAGATT CTCAAGCTCT ATCTCGACCG CGCCTATATG GGCGGCGGCA CCTTCGGTGC GGTGGCGGCG GCGGATTACT ATTTCGGCAA GCGCCTGCAG GACATCACGC TGGCGGAAGC CGCGATGCTC GCCGGCCTGT TCAAGGCGCC GACCAAATAC TCGCCCAACG TCAACCTGCC CGCCGCCCGC GGCCGGGCGG TGGACGTGCT GCACAACATG GTCGAGGCGG GCTTCGTCAC GGAAGGCCAG ATCCAGACGG CGTTGCGCAA CCCCGCGACC CCGGTGACCC GCACCAAGGA CATCACGGCC GACTACTACC TCGATTGGGC CTTCAACGAG GTGAAGCGGA TGGCCGATGC GGGCAAGCTC CGCAACGATC GCGTGCTCAC GGTGAAGACG CCGCTCGACC TCTCGATCCA GCGCTCCGCC GACCAGGCCG TCGAGAACAT GCTGCGGCGG CTGGGCGACC AGTACGACGT GGACGAGGCC GGCGTGGTGA TCCTCGATCC CGACGGGGCG CTGCGTGCCA TGGTCGGCGG CGCCGATTAC GGCGAGAGCC AGTTCAACCG CGCCACCGAT GCGCTGCGCC AGCCGGGCTC GTCGTTCAAG CCCTATGTCT ACGCCGCGGC GCTCGCCTCC GGCCTGTTCA AGCCGGACAC GCAGGTGGTG GATTCGCCGG TCTGCGTCGG CAATTGGTGC CCGCAGAATT ACGGCCGCTC CTATTCCGGG CGCCAGCCGA TGTGGCTCGC GGTGGCCAAA TCGGTCAACA CGATCCCGAT CAAGGTCACC ACGGCCATCG GCAAGGGGCT TGGCATCACC CACGACTGGA AGGCGGCGAA GGCCGGGCGC GAGAAAATCA TTCAGCTCGC GAAAGCGATG GGCGTGACGA CGCCGCTGAC CGACACGCCC TCGCTGCCGA TCGGCGCCAC CGAGGTGACA GTGATGGATC AGGCGGCCGG CTTTGCCGTG TTCGCCAACG GGGGCAAGGT CGCCAAGCCC TACGTCGCCA GCGAGGTGCG CAATTCCAGC GGCGAGGTGA TCTACCGCCA CGCCGACGAG AAGCCGGTGC AGGTGCTCTC GTCCCAGGTC ACGGCCGACA TGAACTACAT GCTCAATAAG GTCGTCGAGG AGGGCACTGC GCGAAAGGCC CAAATCGAGG GCGTGAAGGT CGCGGGCAAG ACCGGCACGA CCAACGGCTA CCGCGATGCG TGGTTCGTCG GCTACACCGG CAACTATGTC GGCGCCGTCT GGTACGGTAA CGACGACCAC AGCCCGACCA ACAAGATGAC CGGCGGTTCG CTCCCCGCGA TGACGTGGCA CGAGATCATG GCCCCTGCCC ATCAGGGCAT CGAATTGAAG CCGATGCCCG GCCTGAACGA TCGCAGGAGC GCGCCGCAGG CCGCCCAGGC GCAGGCCGAC GGCGCGGCGG CCGCCGCCAG CACCGGCGGC CGGCTCTCGC GCCGTTCCTT CGAGGTGCTG TCGGGCCTCA ACGGCCTGTT CCGCAACGTC GAGACCAACC GCTCCGCCGC CAAAAGCGAA CCCGTCAAGA GCGAGCCCGG CAAGAGCGAT CCGGCGCGCT CCGGCGCCGT CGCCCCCGAT CGGATGCGGG CGCCCGGCCT CGTGCCCGTC GATGTCGCCG AGGGCGCGCG CGCCTCCGGC GGCTTCGGGA CGCCCTGA
|
Protein sequence | MRLPRLKTLT TRISRAALAF DAWVNASLYE GGHSTTEAYE RFQARMQVFS VRGWKRYALD LTSEGVTIGT AGALLLLFLA QPAFNLTSDN WLKAQDLAVT FLDRYGTEVG RRGIKHDDSL KFDDFPELMI KALLSTEDRR FYEHWGIDPI GTSRALVSNS SGKGNVQGGS TLTQQLAKNL FLTNERSLER KVNEAFLAFW LEAHLTKNQI LKLYLDRAYM GGGTFGAVAA ADYYFGKRLQ DITLAEAAML AGLFKAPTKY SPNVNLPAAR GRAVDVLHNM VEAGFVTEGQ IQTALRNPAT PVTRTKDITA DYYLDWAFNE VKRMADAGKL RNDRVLTVKT PLDLSIQRSA DQAVENMLRR LGDQYDVDEA GVVILDPDGA LRAMVGGADY GESQFNRATD ALRQPGSSFK PYVYAAALAS GLFKPDTQVV DSPVCVGNWC PQNYGRSYSG RQPMWLAVAK SVNTIPIKVT TAIGKGLGIT HDWKAAKAGR EKIIQLAKAM GVTTPLTDTP SLPIGATEVT VMDQAAGFAV FANGGKVAKP YVASEVRNSS GEVIYRHADE KPVQVLSSQV TADMNYMLNK VVEEGTARKA QIEGVKVAGK TGTTNGYRDA WFVGYTGNYV GAVWYGNDDH SPTNKMTGGS LPAMTWHEIM APAHQGIELK PMPGLNDRRS APQAAQAQAD GAAAAASTGG RLSRRSFEVL SGLNGLFRNV ETNRSAAKSE PVKSEPGKSD PARSGAVAPD RMRAPGLVPV DVAEGARASG GFGTP
|
| |