Gene Mchl_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0878 
Symbol 
ID7115955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp894758 
End bp895747 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID643523681 
ProductExtensin family protein 
Protein accessionYP_002419724 
Protein GI218528908 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.268141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.17078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGTA AAGCGTTAGC GTTCTCGGCT CTGGTGCTGT TCGGCGCGGG GCTCACGGGC 
TGTGCGATCA ACCGGTTCGA GCGCCGGGAA GCATGGCGCG ACCAAGCCGA ACAGATGTGC
ATCGCGCGCA AGCTCGTGCA GCCGACGGCC TATGTCTCGC TCGCCAAGGA GATCGACGGC
CCCGGCCCCT GCGGCATGCA GCAGCCGTTC AAGGTCACCC GGCTCGGTGG CGGCACGGTG
GCGCTCAAGC AGCGCATGAC CCTGGCTTGC CCGGCGCTCG CCGAGGCCGA GGCGTGGCTC
GCCGACACGA TCCAACCCGC CGCCAACCTC TATTTCGGCG TGCCGGTGGC CGAGATCAAC
GCGGGCACCT ATTCCTGCCG CGGCCGCAAC AACCAAGCCG GTGCCAAACT CTCCGAGCAT
TCGTTCGGCA ACGCGCTCGA CATCATGTCC TTCACGCTCG CCGACGGGCA CGTCATCACC
GTCAAGGGAG GCTGGCGCGG CACCGAGGCC GAGCAGGCCT TCCTGCGCGA GGTCTTCGTG
GGGGCCTGTG CCCGGTTCTC GACCGTGCTG GCGCCGGGTT CCAACGTGTT CCACTACGAC
CACATCCACG TCGATCTGGC GATGCACGAC CCGCGCGGCC TGAAGCGCAT CTGCAAGCCG
CTGCTGAAGT TCGAGTCGCA GCTCAACCTT GCCGACGGCT CGCCGCGGCC GCTGGCCTCG
CCCCGCCCGC CCGCGCGTCA GACCGTCCCG ACCCAGGCCC CGATCGACGT CGAAGAGGAC
GATCCCTACG GCGTCGCGCC GACCTCCTCG CGCACGACCG GCACGCGCGT CGCCCGCGCC
CCGGCCGCCC CGGCGCCGAC GGCCTATGCC GCCGCTCCGG CCCCAAGCCG GCCACGCTCC
CCGGTTCCGG CGCATGACGC GGCCTACGCG CCGCTGTCGC TGGCCGCGCC CCATGCCTCG
GACCACGCTT CGGACGAGCC GATCTATTAA
 
Protein sequence
MWRKALAFSA LVLFGAGLTG CAINRFERRE AWRDQAEQMC IARKLVQPTA YVSLAKEIDG 
PGPCGMQQPF KVTRLGGGTV ALKQRMTLAC PALAEAEAWL ADTIQPAANL YFGVPVAEIN
AGTYSCRGRN NQAGAKLSEH SFGNALDIMS FTLADGHVIT VKGGWRGTEA EQAFLREVFV
GACARFSTVL APGSNVFHYD HIHVDLAMHD PRGLKRICKP LLKFESQLNL ADGSPRPLAS
PRPPARQTVP TQAPIDVEED DPYGVAPTSS RTTGTRVARA PAAPAPTAYA AAPAPSRPRS
PVPAHDAAYA PLSLAAPHAS DHASDEPIY