Gene Mchl_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0876 
Symbol 
ID7115953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp889922 
End bp893320 
Gene Length3399 bp 
Protein Length1132 aa 
Translation table11 
GC content70% 
IMG OID643523679 
Productsignal transduction histidine kinase 
Protein accessionYP_002419722 
Protein GI218528906 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.61927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.464028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCAAA GAACAGACCC GCCCGGGTGG CCGTCGAATC GCGACGCAAC GGCGCAACGG 
ATCCTTGAAT TCGATTGGGC CGAAGCGGCG CTTCGGGCGA GCGAAGAGAA GTACCGCACC
CTGTTCCAGA CCATGGGGCA GGGTTTCTGC GAACTCGAAT TCGTGCGCGA CGAGCAGGGC
CGGGCCGTCG ATTTCCGCTA CATCGAGCTG AATCCCGCCT TCGAGCGGCT GGTCGGCCTG
CCGGCCGCGG AGGCACGCGG GAGGACGGGA CGCGAAGTGG TGCCCGACCT CGATCTCTGG
TGGGTTGAGA CCTACGACCG CATCGCCGCG ACGGGTCTGC CGGCACGGCT GGAGCACACG
GACACGCCGA TGGGGCGCTG GTTCGAGGTC TCCGTCTACC CGCAGGCGAA CGACCGCCTG
CTGATCCTCT ACGACGACGT CACCGAGCGC AAAGTCGCCG AGACGGCCCT GCGCGATCGC
GAGGAGCGGC AGGCCTTCCT CCTGGCGCTG AGCGATGCGG TGCGCTCGCT GACCGATCCG
GAGGCGATCC AGAGCGCGGC ATGCCGGCTG GTGGGCGAGC GGCTGGATGT GGACCGGTGC
TACTATGCGA CCGCCGACGA AGCCGCCGGG ATCATCCGTA TCGCGTGGGA CCACGTTCGC
GGCGATGCGC CCTCAATCGC CGGCGAGCAC AGGCTCGCGG ACTTCGCATG GTCCGCCGAG
ATCCTCGGCC GCGGGGAGTG CCACGTCCTG GCCGACACAC AGGCCTCGGT TCCGGAGGCG
AGCCGTCCCG CCTTCGCCGC CCTGCAGATC GCCGCCTGCA TGGGCGCACC GCTCATCAAG
AACGGCAGCC TGGTCGGCGC GCTCTGCGTC ACCCACTCGA CTCCACGCGA TTGGACGAGG
GCCGACCTGG GATTGCTGCG GGAGGTGGCC GAGCGGATCT GGTCGGCGGT CGAGCGCGGC
CGGGCGGAGG CGGACATCCG GCGCAAGAAC GCCGTGCTCG AAGGGATCAA CCGCATCTTC
CGTGAGGCGC TGACCGCTCC CACGGAGGAG GAACTCGGCC GCGTCTGCCT CGCGGTCGCC
GAGGATGTGA CGCAGAGCGC CTTCAGCTTC ATGGGGGAGG TCGATCAGGA GAACGACCGG
TTCGACGAAC TCTCCATCAG CGATCGCGGC TGGCAGCACT TCGCGATGGA GAACTCCGCT
TTTTCCAAGG GCGTCGGCCC GAAAGGGCTC AAGATCCACG GTCTCTACGG CCGCGTGCTG
CGCGACGGGA AAAGCCTCAT CGCCAACGAT CCCGGCTCGC ACCCGGACCG GATCGGGACG
CCGGCGGGCC ACCCGAACCT GCAGGCCTTT CTCGGCGTTC CGCTGAAGCG GAACGGACAG
ACCATCGGCA TGATCGGGCT CGGCAACCGC GCGGGCGGAT ACCGGTCGGA GGATCTCGAG
GCCGCCGAGG CCCTCGCCCC GGCCATTCTC CAGGCCCTGC TGAGCAAGCG CACCGCCGAC
ACCCTGCGCG AGAGCGAGGA GCGCTTCCGG ACCCTCGCCG AACTCGTGCC GAGCCTGCTC
TGGAACTGCG ATCCCGAGGG CAAGGTCATC GTCGTGAACC AGCAATGGGG TGCCTATACC
GGCCAGACGC AAGACGAGGT CCAGAACGGC GGTTGGCTGG CCACCATCCC GACCGACGAG
CGGGAGGAGA CGAAGCGCAT CTTCACGGAA GCCTTCACCA CCGGCCGGCC GGTAGAGCGG
CAGCAGCGCA TCCGCCGCCG CGACGGCCCC TTTCGGTGGT TCCTGATCCG CCACGCCCCG
GCGCGGGACG CGGAAGGGCG GATCACGCGC TGGATCGGCG CCGCCACGGA CATCCACGAC
CAGCACATCG CCGCCCAGAG CCTGCGGGCG GAGGAGGCAC GGCAGGCCTT CCTTCTCGAC
CTCGCCGACC GGCTTCAGGA CCAGACCGAC CCACAGGCCG CCCTTCAGAC CGTAGTCGAG
GCGCTGGGGC GCCATCTGGG CGCCGGACGG GTCGGCTACG CGCGCCTCTC CGCAGACGGG
AAGCGGATCG AGCGGCAGGT CGGCTATCAC GCCGAGTCCG AGGCCCGGCT CGGCCCCCTG
CCCATCACGG CCTTCGGCCG GGCGGTTCTC GATCGGCTGC GGAACGGCGA GACGATCATC
GTGGACGATG CCGCGGCCGT GGCAGCCCCC GGCGTCTGGC GACAGGGCGC CGTGGGCAGC
TTCGTGGCGG TGCCGCTGGT CCGCGACGGC CGGGTCCGCA CCGTCCTCTA CCTGACCCAT
CGCGAGCCCC GGACGTGGAC GCGCTCCGAG ACGACCCTGA TCGAGGAGGT GGCCGCGCGG
ACCTGGGAGG CGGCCGAGCG AGCGCAGGCC GAAACGGAGC TGCGCACCAG CGAAGCCCGG
CAGCGTGCCC TGGTCGAAGG CATCCCCCAA CTCGTCTGGC GGGCGGGCGA TGGCGGCGCG
TGGAGCTGGG CGAGCCCGCA ATGGTGCCGC TATACCGGGC AGACCGAGGC TGAGAGCCGC
GGCTTCGGCT GGCTCGACGC GGTTCATCCC GAGGATCGCG ACCGGGCCCA GAATGCCTGG
AGCGGCGCCG CCGCAGCCGA GGTGCTGGCT GTCGACTACC GAATCCGCCA CGCCCCCGAG
GGCCGCTATC GCTGGTTCCA GTCGCGCGCC CTGCCGCTGC GCGAGGGCAG CGACATCGTC
GAGTGGCTGG GCACCTCGAC CGACATCGAC GACCTGCGGC AGCTGCAGGA GCAGCAGGGC
GTGATGGTGG CCGAGCTGCA GCACCGCACG CGCAACCTCA TCACGGTGGT GCGCTCGCTG
GCCGAGCAGA CCATGGCGCG AAGCGATTCC ATGCCGATGT TCCGCGCGCG GTTCTACGAC
CGGCTCGCGG TGCTCTCGCG GGTGCAGGGC CTGCTTTCCC GCTCCACCAT CGAGCCGATC
ACGCTGCACG CGCTCATCGC CACGGAACTC GACGCCCTCG GCGCCTGGGA GGCCTCCGAC
CGCATCTATC TCGACGGCCC GTCCGTGCGG CTGCGCAAGG CGACGGTGCA GACCTTCGCG
CTGGCCCTGC ACGAACTTGC CACCAACGCC CGCAAATACG GCGCGCTCTC CGGAGACACG
GGGCGGCTGA GCGTGACGTG GCGCACCTAT ACCGAGGACG ACCGGATGCG GCTCGCCCTG
CATTGGAGCG AGACGGAGAT CGAGCGCCCG CGCGAGGAGG GCGCCGCGCA ACGGCGCGGC
TACGGGCGCG AGCTAATCGA GAAGGCGCTG CCCTACGCCC TCGACGCGCG CACGCGCTAC
GAACTGAGCG AGACCGCTCT GCACTGCTCG ATCGACCTGC CGCTCACGGA ACGGCGCAAG
GCGGCGCGTC AAACCAAGGA CCGAGAGACG CCGGCCTGA
 
Protein sequence
MGQRTDPPGW PSNRDATAQR ILEFDWAEAA LRASEEKYRT LFQTMGQGFC ELEFVRDEQG 
RAVDFRYIEL NPAFERLVGL PAAEARGRTG REVVPDLDLW WVETYDRIAA TGLPARLEHT
DTPMGRWFEV SVYPQANDRL LILYDDVTER KVAETALRDR EERQAFLLAL SDAVRSLTDP
EAIQSAACRL VGERLDVDRC YYATADEAAG IIRIAWDHVR GDAPSIAGEH RLADFAWSAE
ILGRGECHVL ADTQASVPEA SRPAFAALQI AACMGAPLIK NGSLVGALCV THSTPRDWTR
ADLGLLREVA ERIWSAVERG RAEADIRRKN AVLEGINRIF REALTAPTEE ELGRVCLAVA
EDVTQSAFSF MGEVDQENDR FDELSISDRG WQHFAMENSA FSKGVGPKGL KIHGLYGRVL
RDGKSLIAND PGSHPDRIGT PAGHPNLQAF LGVPLKRNGQ TIGMIGLGNR AGGYRSEDLE
AAEALAPAIL QALLSKRTAD TLRESEERFR TLAELVPSLL WNCDPEGKVI VVNQQWGAYT
GQTQDEVQNG GWLATIPTDE REETKRIFTE AFTTGRPVER QQRIRRRDGP FRWFLIRHAP
ARDAEGRITR WIGAATDIHD QHIAAQSLRA EEARQAFLLD LADRLQDQTD PQAALQTVVE
ALGRHLGAGR VGYARLSADG KRIERQVGYH AESEARLGPL PITAFGRAVL DRLRNGETII
VDDAAAVAAP GVWRQGAVGS FVAVPLVRDG RVRTVLYLTH REPRTWTRSE TTLIEEVAAR
TWEAAERAQA ETELRTSEAR QRALVEGIPQ LVWRAGDGGA WSWASPQWCR YTGQTEAESR
GFGWLDAVHP EDRDRAQNAW SGAAAAEVLA VDYRIRHAPE GRYRWFQSRA LPLREGSDIV
EWLGTSTDID DLRQLQEQQG VMVAELQHRT RNLITVVRSL AEQTMARSDS MPMFRARFYD
RLAVLSRVQG LLSRSTIEPI TLHALIATEL DALGAWEASD RIYLDGPSVR LRKATVQTFA
LALHELATNA RKYGALSGDT GRLSVTWRTY TEDDRMRLAL HWSETEIERP REEGAAQRRG
YGRELIEKAL PYALDARTRY ELSETALHCS IDLPLTERRK AARQTKDRET PA