Gene Mchl_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0872 
Symbol 
ID7115949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp884127 
End bp885164 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content74% 
IMG OID643523675 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002419718 
Protein GI218528902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.288578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA GCCCGACCCC CGACGCCTCG CCCTTCGCCG ACATCCGCCG CCTGCTCACG 
GAGATGCCCG GCCCCGACGG GGACGCGGTC GCCGCGATCC GAGCGCGGGA TGCCAGCCTC
ACCAAGCCGC CGGGTGCGCT CGGGCGGCTC GAAGCGTTCG TGGAATGGCT CGGCGCGTGG
CAGGGCAAGG CCAAGCCCAC GCTCGACCGG CCGATGGTCT GCGTGTTCGC CGGCAGCCAC
GGCGTGGTGG AGCGCGGCGT CTCGGCCTTC CCGGCCGCGG TCAACCGGCA GATGCTGGAC
AACTTCGCCG CCGGGGGGGC GGCGATCAAC CAGCTCTGCG CCGCCTACGG CCTCGGCTTC
CGGGTGTTCG ACCTCGCCGT GGATCTGCCG ACCGGCGACA TCTGCTCCGG CCCGGCCCTC
GACGAGAAGG GGTGCGTGGC CACCATGGCC TTCGGCATGG AAGCGGTGGC GGCGGGCACC
GATTGCCTCG CGGTCGGCGA GATGGGCATC GGCAACACCA CGGTCGCGGC GGCGATCTAC
GCCGCGCTCT ACGGCGGCGA GGCCGAGCAC TGGGTCGGGC GCGGCACCGG CCTCGATGCG
GCCGGCCTCG ACCGCAAGGC GCAGGCCGTG CGGCTGGCGC TCGACACCCA CAAGGATCAT
CTCGGCGACC CGCTGACGAT CCTGGCGCGC CTCGGTGGCC GGGAGATCGC GGCGATGGCC
GGGGCCATCC TCGCCGCGCG GCTGCAGAGG GTGCCGGTGG TGCTCGACGG CTATGTCGCG
ACCGCCGCGG CGGCCATTCT GCACGCCGCC GACCCCCGCG CCCTCGACCA CTGCATCGCC
GGGCATCTTT CGGCCGAGGG CGCGCATGGC GAGGTGCTGG AACGGCTCGG CCTCAAGCCC
GTCCTGTCGC TCGATATGCG CCTCGGCGAA GCCTCCGGCG CGGCCCTGGC GCTCGGCCTG
CTGAAGGGCG CGCTCGCCTG CCACCGCGAT ATGGCGACGT TCGAGCAGGC GGGGGTTTCG
GGCAAGAGCG CGGACTGA
 
Protein sequence
MTSSPTPDAS PFADIRRLLT EMPGPDGDAV AAIRARDASL TKPPGALGRL EAFVEWLGAW 
QGKAKPTLDR PMVCVFAGSH GVVERGVSAF PAAVNRQMLD NFAAGGAAIN QLCAAYGLGF
RVFDLAVDLP TGDICSGPAL DEKGCVATMA FGMEAVAAGT DCLAVGEMGI GNTTVAAAIY
AALYGGEAEH WVGRGTGLDA AGLDRKAQAV RLALDTHKDH LGDPLTILAR LGGREIAAMA
GAILAARLQR VPVVLDGYVA TAAAAILHAA DPRALDHCIA GHLSAEGAHG EVLERLGLKP
VLSLDMRLGE ASGAALALGL LKGALACHRD MATFEQAGVS GKSAD