| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0868 |
|---|
| Symbol | |
|---|
| ID | 7115945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 881278 |
|---|
| End bp | 881970 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643523671 |
|---|
| Product | putative transmembrane signal peptide protein |
|---|
| Protein accession | YP_002419714 |
|---|
| Protein GI | 218528898 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3577] Predicted aspartyl protease |
|---|
| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.533074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.174199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGGG CCGCGCTCGC CATTCTCGGG GTCGGCCTCG CCGTCCTGAT CGCCAACCAT
GACGGCGGCC CGGTGATGGG GCTCGATGCC GATCAGCTCG CTGGCGTCGT CTCGATGACC
GCGCTGCTGT TGCTGCTCGT CGCCGGCCGC TGGCGGCAGG CGCTCGTCAT GCCGGGCAAG
ACCCTGGGTT CGATCCTGAT CTGGCTCGCC ATCGGCGCGG TGATCGTCGT CGGCTACACC
TATCGCGACG ACGCGCAGCG GGTCGGCGCC AATGTCGTCG GGGCCCTGCG CCCCGGCACC
GCCGTCGTCG GCCCCGGCGG CGAGGTGACG ATCACCCGCC GCTCCGACGG CGATTTCGCC
GTTCTGGCGG CGGTGAACGG CGGCGCCGAG CAGCGCTTCG TCTTCGACAC GGGAGCGAGC
AGCGTCGTGC TCACCGCCGA GACCGCCGAG CGCCTCGGCA TCCGTCCGCC GGAGAGCGCC
TTCACCCAGC GCGTCTCCAC CGCCAACGGC ACCGCACTCA CGGCACCGAT CCGGCTCGAC
TCGATCACGG TCGGCCCGAT CACCGAGCGC AACGTCAACG CGATGGTGAG CCGGCCCGGC
GTGTTGACCA CCAACCTGCT CGGCCAGAGC TTCCTCGACC GGTTGCCCTC CTACGAGGTG
CGCGGCGACC GGCTGATCCT GCGCAGCCGC TGA
|
|---|
| Protein sequence | MMWAALAILG VGLAVLIANH DGGPVMGLDA DQLAGVVSMT ALLLLLVAGR WRQALVMPGK
TLGSILIWLA IGAVIVVGYT YRDDAQRVGA NVVGALRPGT AVVGPGGEVT ITRRSDGDFA
VLAAVNGGAE QRFVFDTGAS SVVLTAETAE RLGIRPPESA FTQRVSTANG TALTAPIRLD
SITVGPITER NVNAMVSRPG VLTTNLLGQS FLDRLPSYEV RGDRLILRSR
|
|---|
| |