| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0842 |
|---|
| Symbol | |
|---|
| ID | 7115835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 860335 |
|---|
| End bp | 860913 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643523645 |
|---|
| Product | intracellular protease, PfpI family |
|---|
| Protein accession | YP_002419688 |
|---|
| Protein GI | 218528872 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.244965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00871644 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATA TTCGCGAGGC CAAGATCCTC ATCATCGCCA CCGACGGGTT CGAGGAAAGC
GAGCTGACGG TACCGCAAGC CAAGCTGAAG GAGGCGGGCG CCACGGTGAC CGTCGCGAGC
CCGCAATCAC GCCAGTCCAA GGGGACCATC CGCGGCTGGG ACAACACCGA CTGGGGCAAG
GACGTGCCGG TCGATCTCGA TCTCGAGAGC GTGAACCCCG CCGATTACGA TGCGCTGGTT
CTGCCGGGCG GGCAGATCAA CCCGGACAAG CTGCGCCTCG AGCCGAAGGC GCTCGAAGTG
GTCCGGACCT TCCTCACCTC CGGCAAGGTC GTGGCCGCGA TCTGTCACGG CCCCTGGCTG
CTGATCGAGG CCGGCGCGGT GAAGGGGCGC ACGCTCACCT CGTTCGCCTC GATCAAGACC
GACGTGATCA ACGCGGGCGG CGACTGGCAG GACAAGGCGG TCGTGACCGA TGGCGGCATC
ATCACCAGCC GCAACCCCGG CGATCTCGAT GCCTTCTGCG CCAAGATCAT CGAGGAGGTG
AAGGAAGGCC GCCACGAGCC GCGTCAGCTC GCCGCCTGA
|
|---|
| Protein sequence | MPDIREAKIL IIATDGFEES ELTVPQAKLK EAGATVTVAS PQSRQSKGTI RGWDNTDWGK
DVPVDLDLES VNPADYDALV LPGGQINPDK LRLEPKALEV VRTFLTSGKV VAAICHGPWL
LIEAGAVKGR TLTSFASIKT DVINAGGDWQ DKAVVTDGGI ITSRNPGDLD AFCAKIIEEV
KEGRHEPRQL AA
|
|---|
| |