| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0835 |
|---|
| Symbol | |
|---|
| ID | 7115828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 852217 |
|---|
| End bp | 853683 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643523638 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_002419681 |
|---|
| Protein GI | 218528865 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0971828 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAGA GTGCCGAACA CGACCGGATC GAAGCCGAAC TGGTCCGCGT TTCCAAAAGC
ACCGACCCGT TCGCGGCCGC CGTTAAGGCG ACGCGGATGC CGATGCTGAT CACCGACCCG
CACCGGCCCG ACAACCCGAT CGTCTTCGTC AACGGCGCCT TCAGCAAGCT CACCGGCTAC
AGCCGCGAGG AGATCCTGGG GCGCAACTGC CGCTTCCTGC AGGGACCGGA GACCGACCCG
CGCGACGTCG CCCGGATCCG TGACGCCGTC GAGCGGCGCG TGCCCGTCGA GATCGACCTC
CTCAACCACA AGAAGAGCGG CGAGGTCTTC TGGAACCGCC TGCTGATCTC GCCCGTCTTC
GACGACGAGG GGCAACTCAC CTACTTCTTC GCCTCGCAGT TCGACGTGAC CCTGGAACGC
GACCGGATGG TCCGGCTCCA GCGCGACCGC GACGCCCTGG AACAGGAGGT CGAGCGCCGC
AACGACGACC TCACCCGCAG CGAGCACCGC CTCGAATTCA TGCTGGCCGC CGGCCGGCTC
GGCGCCTGGT CCCTCGACCT CGCCGAGCGC CGGCTCGTCG CCTCCACCCT GTGCAAGCAG
AATTTCGGGC GCCCGCTCAG CGAGCCCTTC AGCTACGACG ACCTCGTCGA GGCGGTGGTG
CCCGAGGATC GCGAACGGAT GCAGGCCGCG ATGCAGGCGG CCATCGACCG CCGGAGCGAT
TACGACGTCG AGCACCGCGT CACGGCCCCC GGCGGCGAGG TGCGCTGGGT GCAGTTGCGC
GGCCGGGCCT ATTACCGGGC CGACGGGGCG CCGCATTCCA TGGCCGGCAT CTCGCTGGAC
GTGACCGACC GCAAGCGGGC CGACGAGCAG CGCACCCTGC TCGCCGCCGA GATGAAGCAC
CGGGTGAAGA ACACGATCGC CACGGTCCAA TCCATCGCCC ACCAGACCCT GCGCAACGCC
GCTTCGCTCG ACGACGCCCG CCGGACGCTG GATGCGCGTC TCAACTCGCT TGCCGCCGCC
CACGACATCC TCACCACGGA GGCCACCGCC GGGGTGACGC TCGCCGAGGC GGTGGAGAGC
GCCCTGCAGC CGTTCCGCGT CAGTCCGCGC AACCGCATCC GCTTCGGCGG GCCGGAGGTG
CGCCTCACCT CCCGCCTGAC GCTGGCCGTG GTGATGGCGC TGCACGAGCT TGCCACCAAC
GCCGTGAAGT ATGGCGGCCT CTCCAACAAT TCGGGCCGCA TCATCCTCAA CTGGGACGTC
GAGGGTCGTG CGTCCAAGCG CCTGCTGATG CGCTGGGAGG AGTTCGACGG TCCGCCGGTC
GAGAGGCCGT CGCGGGTCGG TTTCGGCACG CGCATGATCG AGCGGGTGCT GGCGGCCGAG
TTCGGCGGCG AGGCCAAAAT CGACTACCGC AGCCGCGGCC TCGTCCTCAC GCTCGAGGCG
CCGCTGCCCG AGCGCGAGGT CGCCTGA
|
|---|
| Protein sequence | MTKSAEHDRI EAELVRVSKS TDPFAAAVKA TRMPMLITDP HRPDNPIVFV NGAFSKLTGY
SREEILGRNC RFLQGPETDP RDVARIRDAV ERRVPVEIDL LNHKKSGEVF WNRLLISPVF
DDEGQLTYFF ASQFDVTLER DRMVRLQRDR DALEQEVERR NDDLTRSEHR LEFMLAAGRL
GAWSLDLAER RLVASTLCKQ NFGRPLSEPF SYDDLVEAVV PEDRERMQAA MQAAIDRRSD
YDVEHRVTAP GGEVRWVQLR GRAYYRADGA PHSMAGISLD VTDRKRADEQ RTLLAAEMKH
RVKNTIATVQ SIAHQTLRNA ASLDDARRTL DARLNSLAAA HDILTTEATA GVTLAEAVES
ALQPFRVSPR NRIRFGGPEV RLTSRLTLAV VMALHELATN AVKYGGLSNN SGRIILNWDV
EGRASKRLLM RWEEFDGPPV ERPSRVGFGT RMIERVLAAE FGGEAKIDYR SRGLVLTLEA
PLPEREVA
|
|---|
| |