| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0809 |
|---|
| Symbol | |
|---|
| ID | 7115802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 826611 |
|---|
| End bp | 827651 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643523613 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002419656 |
|---|
| Protein GI | 218528840 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.268471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGG TTCTCGTCAC CGGCGGGGCC GGCTTCGTCG GCCGCCACGC CATCGCTGCG
CTCGTCGCTC GCGGCTTCGA GGTTCACGCC ATCGGCCGAA CGGCCCCAGA GGGTGTCCAC
GCCTTCCACG CGACCGACCT GCTCGATCCG GCGCAGCGCC GGGCTGCCGT GCAGGCGGCC
TCGGCGAGCC ACCTGCTCCA CCTCGCCTGG ATCACCACAC CCGGCCGCTA CTGGCAGGCA
CCGGACAACC TCGATTGGAC GGCGGCGAGC CTCGACCTCG TGCGGACGTT CCGCGAGGCG
GGCGGCAACC GCGCCGTGGT GGCCGGGACA TGTGCCGAGT ACGATTGGAC AGGGATCAAC
CTTCTGCCGC CTGCAGAACT CGAATCTCCC TCGCCCCGCA CGCGGGGAAT GGGCTTCGGC
GACCCGGTCG TCGCGACCCT CTCCCCGCAA GCGGGGCGCG GGGATGCAGC GGCGATCCGA
GAGGGTCATT TGGCGGAGGT AGCCCCCTGC TGCCCAGCGA CGCTCTACGG CGCCGCCAAG
GACGGTCTCA GCCGCATCCT GCAAGCCTAC GCGGCGACCG CCGGACTCTC CCTCGGCTGG
GGGCGATTGT TCTACCTCTA CGGTCCAGGC GAGACGCCGG GCCGGCTTGT CGGCGATGCG
GCGCGGGCGC TGCTCGCGGG CCAGCGTCTC GCCACCAGCG AGGGCCGGCA GCGGCGCGAT
TTCCTGCATG TCGCCGATGT GGGAGCGGCC GTCACAGCCC TGCTCGACTC GGAGGTGGAG
GGGCCCGTCA ATCTCGGCTC CGGTGAAGCG GTGCCGGTGC GCAGAATCCT GGAAACGATC
GGTGCGCTGA CCGGACGCTC CGATCTGATC GATTTCGGCG CCCGCCCCCT CGGCCCGACG
GAGCCGGCCT GCATCGAGGC CGACATCCGG CGCCTGACGG ACGAGGTTGG CTTTTCGCCC
TGCTACGGCC TGGAACAGGG CCTAGAGCAA ACCGTCGCGG CGTGGCGCGC CGCGCTCAGC
AATGCGGCAT CAATCCCTTG A
|
|---|
| Protein sequence | MKRVLVTGGA GFVGRHAIAA LVARGFEVHA IGRTAPEGVH AFHATDLLDP AQRRAAVQAA
SASHLLHLAW ITTPGRYWQA PDNLDWTAAS LDLVRTFREA GGNRAVVAGT CAEYDWTGIN
LLPPAELESP SPRTRGMGFG DPVVATLSPQ AGRGDAAAIR EGHLAEVAPC CPATLYGAAK
DGLSRILQAY AATAGLSLGW GRLFYLYGPG ETPGRLVGDA ARALLAGQRL ATSEGRQRRD
FLHVADVGAA VTALLDSEVE GPVNLGSGEA VPVRRILETI GALTGRSDLI DFGARPLGPT
EPACIEADIR RLTDEVGFSP CYGLEQGLEQ TVAAWRAALS NAASIP
|
|---|
| |