Gene Mchl_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0540 
Symbol 
ID7117781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp536453 
End bp539722 
Gene Length3270 bp 
Protein Length1089 aa 
Translation table11 
GC content65% 
IMG OID643523335 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002419399 
Protein GI218528583 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCTG ATCCCTGCGG CTCCTCCGAA CTCGATCGCA TTGCACGCCA TGTCATCGAG 
AATGCGACGG ACTTCGCCAT CATCACAACC GACTCCGAAG GCCGCGTCAC CAGCTGGAAC
CCTGGCGCGG AAGCGATCTT CGGATGGATG CCGGGTGAGA TCGTCGGCCA AACCATCACG
CTCATCCACA CGCCGGAAGA TCGCAGGGCG GGGACCGTCC TGCGCGAGTT CGAAGCGGCG
AAGCGGGACG GCCGTTGTGA ACATGAACGC TGGCGGATTC GAAAGGACGG GCAGCCCGTC
TTCTCCTCCG GGGTGACCAC ACCGCTTCGC GACCCCAGCT CGGGCGAGGA TCTCGGCTAC
CTGAAGGTGC TGCGGGATCG GACCACCGAG GAGACCACGG CGGCTAAGAA GCGGGAGGTG
GATGAGCGCA ACGCCTTCCT GCTTCAGCTC ACCGACATCC TGCGGCGAGG CGACGAGACG
ATCGAGCTGC TGCGCTCCAT TTGCACGCTT CTCGGAACCT GGTTCGGGGT GCAACGGGCC
GGCTACGGCC ACGTCGACGA GGTGGAGGAT CTCGTGGAGT ACGAGGTCTG CTGGACGGAC
GGGACTGTTT CCGCCTTACT GGGGGAGTTC CCGGCAAGCG CGTTTGGCGT CAAAGTGATG
GAGCGCCTCC GGGTCGGGTG GACGGTCGCG ATGCCGGACG TGCGATCCGA TCCGCTGACA
GAAGACAGCG CCTCCCAGAA GACGTCCAAA GAAGTGGATA CACGAGCGGT GCTCGTGACC
CCGTTGGTCA AAGCCGGGCG GCTTCGCACT ATCGTCTACC TGAACCAGCG GACGTCCCGA
GCTTGGACTC CGACCGAGAT TTCGTTGCTG GAAGAGGTCG CGGAGCGTAG CCGCGAACTC
ATCGAACGAG GGCGCGCCGA AGACGCACTC CGCACGGAGC GCGCTCGGCT CGACCTAGCG
GCGCGGGCAG CCAGACTCGG GATTTGGGAC TGGCGCCTTG AGACCGGCGA GCTGGATTTC
TCCCAACGCG CCCGGGAGAT TTGGGGCTTC CCGGCCGATC TCGCCGTCAC TTACGAGGCC
CTCGCAGACG CGATGCATCC GGAGGACATC GCCGCGGTGC AGGGGCAGTT CACGCGCGCC
ACCCATCCGG CCATACGGGA TGAGGCGCCT TACGAATATC GGGTTTGCAC GCCATCAGGC
GTGCGCTGGA TCAGGGCGCA TGGCGAAGCT GTCTTCGAGC AGCGCCACGC GCAGGTGACG
GCTGTCCGAT ATGTCGGCAC GATGGAAGAC ATCACCGAGA CGCGCGAAAC CCAGGCCGCG
CTTGCAGCGT CCGAAGCGCG CCTAAAGCTT GCCGTGGACG CCGGCCGGAT GGCGGTCTGG
GAGATCAACG CCGTCGGCGA GGTCGCCCAT GCCCCGCAAC TGAACAAGCT TCTCGGCCTC
CCGGAAGACG CCCGACCGAC ACTCGCCGAA ATCCAGGAGC GGTACTATCC CGGGGAGCTG
GAGCGGCTCC AAGGCCTCGG GGAAGCCGCG ATGCTCAACG GCGAGCGCTA CCTGGAATTC
GAGTACCGCC ACCTCTGGCC GAACGATGAG GTTCGTTGGC TTTCGGCCCG AGCCGAGTTC
CTCTTCACGC CGGGCGGCGA GCCCGCCGGC GTCATCGGGG TGGTGATGGA CATCACTGAC
CGCAAACATG CCGAGCTGGC GCTCACCGCG TTGAACCAGT CGCTCGAAAG CGAGGTGGCC
GCCCGGACGG CCGAGCGGGA CCGCATGTGG CGGATCTCCA CCGAACTCAT GCTGGTGGCC
GACTTCGAAG CCACCATACG TGCGGTCAAT CCCGCCTGGA CCCTGCAACT GGGGTATGAG
CCCCGGGACC TCCAGGGCCG GAAGTTCCTA GACCTAGTCC ATCCGGACGA CGTTCAGCCG
ACCCTCGACG AGGTCGGCAA GCTGGCGGAC GGAGTCACCA CCTTCCGGTT TGAGAACCGC
TACCGGCACA AGGATAACTC GTATCGCTGG CTAAGCTGGA CGGCCGTCCC CGAGGACGGG
TTCATCCATG CCGTCGCGCG GGACATTAGC GACGAGAAGG CGGCCGCCGA GGCGCTCCAG
CACACGGAGC AGGCCCTCCG TCAAGCGCAG AAGATGGAGG CGGTTGGCCA GCTCACCGGC
GGCCTTGCAC ACGATTTCAA CAATCTCCTG ACCGCCATCT CGGGCAGCCT AGAACTGCTC
CAGACCCGCC TTAGGCAAGG CCGCCTCAGC GACCTTGACC GGTACATCAA CGCCGCTCAG
GGCGCGGTCA GACGTGCGGC TGCCCTGACT CACCGTCTGC TCGCGTTCTC GCGCAGGCAA
ACGCTCGCCC CGAAACCGAC GGACATGAAC CGACTGGTCG CCGGGATGGA GGAGCTGATC
CGGCGCACCG TGGGTCCCGA AATAGAGGTC GAGGCGGTGA AAGCGGTCGG ACTGTGGCCC
ACGCTGGTCG ACCCGCCGCA GCTTGAGAAC GCACTTCTCA ATCTATGCAT CAACGCGCGC
GACGCCATGC CGAAGGGCGG CCGGATCACC ATCGAGACAG CGAACCGGTG GCTTGACGAT
CATGCGGCGC GGGAGCGCGA CCTGCCGGTT GGCCAGTATC TGTCGTTGAG CGTGTCCGAT
ACCGGCACCG GAATGGCGCC AGCGGTTATC GCCAAAGCGT TCGACCCGTT TTTCACCACC
AAGCCTACGG GCCAGGGTAC GGGCCTTGGT CTCTCAATGA TCTACGGGTT TGCCCGGCAG
TCGGGCGGGC AAGTTCAGAT CTACTCGGAG GTGGGAGAGG GCACCACAGT CTGCATCTAT
CTTCCCCGGC ACTACGGCGA GGTCGGCGGA GATGAAGCGG AGCTTGACCT CGCCACCGCG
CCACGGGCCG AGCAGGGGGA AACGGTGCTG GTCGTGGACG ACGAGTCTTC TGTGCGGATG
CTCGTGACGG AGGTGCTGGA AGACCTAGGC TACTTGGCGG TCGAGGCAGC GGACGGCCCC
TCCGGGCTCA AGATCCTGCA ATCCGACCTG CGAGTTGACC TCATGATCAC TGACGTAGGC
CTGCCCGGCG GCATGAACGG CCGACAAGTA GCGGACGCCG CGCGCGCAAC CCGCCCCGGC
CTCAAGGTGC TCTTCATAAC TGGTTACGCA GAGAACGCAG CTATCGGTAG CGGCCATCTG
GAGCCCGGTA TGCAGATCCT GACGAAGCCG TTCGTGATGG AGACGCTGGC CGCACGAATC
AAGGAGATGC TCACGAAATC GCCAGCGTGA
 
Protein sequence
MTADPCGSSE LDRIARHVIE NATDFAIITT DSEGRVTSWN PGAEAIFGWM PGEIVGQTIT 
LIHTPEDRRA GTVLREFEAA KRDGRCEHER WRIRKDGQPV FSSGVTTPLR DPSSGEDLGY
LKVLRDRTTE ETTAAKKREV DERNAFLLQL TDILRRGDET IELLRSICTL LGTWFGVQRA
GYGHVDEVED LVEYEVCWTD GTVSALLGEF PASAFGVKVM ERLRVGWTVA MPDVRSDPLT
EDSASQKTSK EVDTRAVLVT PLVKAGRLRT IVYLNQRTSR AWTPTEISLL EEVAERSREL
IERGRAEDAL RTERARLDLA ARAARLGIWD WRLETGELDF SQRAREIWGF PADLAVTYEA
LADAMHPEDI AAVQGQFTRA THPAIRDEAP YEYRVCTPSG VRWIRAHGEA VFEQRHAQVT
AVRYVGTMED ITETRETQAA LAASEARLKL AVDAGRMAVW EINAVGEVAH APQLNKLLGL
PEDARPTLAE IQERYYPGEL ERLQGLGEAA MLNGERYLEF EYRHLWPNDE VRWLSARAEF
LFTPGGEPAG VIGVVMDITD RKHAELALTA LNQSLESEVA ARTAERDRMW RISTELMLVA
DFEATIRAVN PAWTLQLGYE PRDLQGRKFL DLVHPDDVQP TLDEVGKLAD GVTTFRFENR
YRHKDNSYRW LSWTAVPEDG FIHAVARDIS DEKAAAEALQ HTEQALRQAQ KMEAVGQLTG
GLAHDFNNLL TAISGSLELL QTRLRQGRLS DLDRYINAAQ GAVRRAAALT HRLLAFSRRQ
TLAPKPTDMN RLVAGMEELI RRTVGPEIEV EAVKAVGLWP TLVDPPQLEN ALLNLCINAR
DAMPKGGRIT IETANRWLDD HAARERDLPV GQYLSLSVSD TGTGMAPAVI AKAFDPFFTT
KPTGQGTGLG LSMIYGFARQ SGGQVQIYSE VGEGTTVCIY LPRHYGEVGG DEAELDLATA
PRAEQGETVL VVDDESSVRM LVTEVLEDLG YLAVEAADGP SGLKILQSDL RVDLMITDVG
LPGGMNGRQV ADAARATRPG LKVLFITGYA ENAAIGSGHL EPGMQILTKP FVMETLAARI
KEMLTKSPA