| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0530 |
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| Symbol | |
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| ID | 7114686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 523898 |
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| End bp | 526285 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643523326 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s) |
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| Protein accession | YP_002419390 |
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| Protein GI | 218528574 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCG TCGTTGGTTG CCTCGTCGAA GCTCATGACT TCAGGCTCGT TGCGTTGGCA
GCCGGCATCT GCGCCCTGTC CGCCTTGACG ACGGTGTGCC TCGTCAGCCA CGCGCGCCGA
GCGAGGGCAT GGGCTCAAGC CGGGTGGCTT GCCGTGGCAG CAGCAGCCGG CGGCTCGGGC
ATCTGGGCGA CCCACTTCAT CGCCATGCTG GCCTTCGCGC CGGGCGTGCC AAGCGGCTAC
CAAGTCGCGC TCACCGGTAT CTCCCTCATC ATTGCCATAG CGTTGGTCGG CTCCGGCCTC
TCGCTCGCAG TGATGGTCGG TGGTCGCGCG GCGGCCTGGG CCGGGGGCGC CATCCTAGGG
TTCGGCATCG CAGCAATGCA CTACACCGGC ATGGCAGCCT ACGAGGTCGC CGGCCACAAG
GCATGGGATC CAGCTACCGT CGCCGCCTCG CTCGCACTCG GCGGTCTCCT TGGGGGCGCC
GCGCTGGCGG CGCAAGTCGG CGCGTGGGGC CTGTCCCGCC AACTACCTGC TGCGTTCCTG
CTGCTGCTCG CCATCTGCAG CCACCACTTC ACCGCCATGG GCGCCGTCAC CATCACGCCG
GACCCGACGC TCACCGTCTC CGAGGCCGCG GTCCCGAACG CGTGGCTCGC GGTCGCGGTC
GCGCTGGCGA GCTTCGCCAT CCTACTGCTC GCCGGTGCAG CCATGGCGCT TGCTGTGCGG
GACCGACGGC ATGCTAAGCT GGAGAGTGAC CGCCTGCGCA GCCTCGCCAA CGCCGCCGTC
GAGGGTCTCA TCGTCTGCAC GGGGGACACC GTCGTCAGCG CAAACCGAAG CTTCGCCAAG
CTCGTCGGCA TGCCTCAGAA CGCTCTCGCG GGCACGACCC TGTCGGCCTA CCTGCCGGGA
GACGCCGCTC GCCTCGCCCT GGCGAGCCAG CTCGAGCGAC CTGTCGAGGC GGAGCTCAAG
CTAGCAGACG GTGGGATGGT GCCGGTCGAG GTCATCATGC AGCCCGTCGA ATATGAAGGG
CGGCCCCACT ACGCCATCGC CGTGCGCGAC CTGCGGGCCC GGCGCCAGGC CGAGAGCCAG
ATCCAGTTCC TGGCTCACCA CGACGCGCTC ACCGGATTGG CCAACCGCGC GAGCTTCGGA
CAGCGCCTCG ACCAGGAGAT GCGTGCCGCC GATGCGGGCG AGCGCAAGCT CGCGTTGCTC
TGCCTAGACC TCGACCGCTT CAAGGAGGTC AACGACCTGT TCGGCCACGC CGCAGGCGAC
GCCATGCTGG AGAGCGTCGC CCGCATCGTC ACGGGCGAAC TCGACGATAC GCAGATGATG
GCCCGTCTCG GCGGCGATGA GTTCGCCGTG CTGATGCCGT GCGGCGGCCC GTCGGAGGCC
GGCCGGCTCG CCGAGCGCAT CCTGGAGGCG CTGCGCTCCG GTAGGGCTGA CACCGGCGGA
CCGCAGATCG CCACCAGCAT CGGCGTCGCC CTGTATCCTG ACGATGCCCT CGAGCAGGCT
GCGCTCCTAA GCTACGCCGA CACCGCCCTC TACCGCGCCA AGTCGGAGGG GCGCGGCACC
TACCGCTTCT TCGAGGCCAG GATGGGCATC GAGGTGCGCG AGCGCCGCGT GCTGGAGCAT
GACCTGCGCC ACGCCGTGGC GCGGGGAGAG ATGCACCTTG TTTATCAGCC GCAGACCGAT
GTCGGCACCG GCGCCGTCAT CGGCTTCGAG GCGCTGCTGC GCTGGAAGCA CCCGGAGCGC
GGCTACGTCT CGCCGGCGGT GTTCATCCCC ATCGCCGAGG AGAGCGACGT CATCCTGCAG
ATCGGCGAGT GGGTACTCCG CGAGGCCTGC CGCGAGGCCG CAACCTGGCC GCAGCCCCTC
ACCATCGCGG TCAACGTCTC GGCGGTGCAG ATCCACAGCA CCCACTTCGT AGGCCTCGTG
CACGAGGTGC TGCTCAGGAC CGGGCTGGCG CCCCACCGGC TGGAGGTCGA GGTGACCGAG
ACTGCGCTGA TCAGCGACCC GAACCGAGCG CTCCTGACCC TGCGCCAGTT GAAGGCGCTC
GGCTTGCGCA TCGCCATGGA CGACTTCGGC ACGGGCTACT CGTCCCTGTC GAACTTGCGC
TCGTTCCCAT TCGATAAGAT CAAGATCGAC GGCTCGTTTG TGCGCTCTGT CGACAGCAAC
GAACAGACGG CGGCCATCGT GCGCTCGGTG CTCGGTCTCG GGCGTGGCCT CGGTCTGCCG
GTGCTGGCGG AAGGCGTCGA GACGGAGGCG GAACTTGGCT TCCTGATCGC CGAGCAGTGC
CACGCCGCCC AGGGCTATCT GATGGGCCGC CCGTCGCCCA TCGCGCAATT CACCCAGCAC
ACGCACGGCA CGATTCCGTT CATCGCCAGA GACCGGAAAC ACGCCTGA
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| Protein sequence | MLTVVGCLVE AHDFRLVALA AGICALSALT TVCLVSHARR ARAWAQAGWL AVAAAAGGSG
IWATHFIAML AFAPGVPSGY QVALTGISLI IAIALVGSGL SLAVMVGGRA AAWAGGAILG
FGIAAMHYTG MAAYEVAGHK AWDPATVAAS LALGGLLGGA ALAAQVGAWG LSRQLPAAFL
LLLAICSHHF TAMGAVTITP DPTLTVSEAA VPNAWLAVAV ALASFAILLL AGAAMALAVR
DRRHAKLESD RLRSLANAAV EGLIVCTGDT VVSANRSFAK LVGMPQNALA GTTLSAYLPG
DAARLALASQ LERPVEAELK LADGGMVPVE VIMQPVEYEG RPHYAIAVRD LRARRQAESQ
IQFLAHHDAL TGLANRASFG QRLDQEMRAA DAGERKLALL CLDLDRFKEV NDLFGHAAGD
AMLESVARIV TGELDDTQMM ARLGGDEFAV LMPCGGPSEA GRLAERILEA LRSGRADTGG
PQIATSIGVA LYPDDALEQA ALLSYADTAL YRAKSEGRGT YRFFEARMGI EVRERRVLEH
DLRHAVARGE MHLVYQPQTD VGTGAVIGFE ALLRWKHPER GYVSPAVFIP IAEESDVILQ
IGEWVLREAC REAATWPQPL TIAVNVSAVQ IHSTHFVGLV HEVLLRTGLA PHRLEVEVTE
TALISDPNRA LLTLRQLKAL GLRIAMDDFG TGYSSLSNLR SFPFDKIKID GSFVRSVDSN
EQTAAIVRSV LGLGRGLGLP VLAEGVETEA ELGFLIAEQC HAAQGYLMGR PSPIAQFTQH
THGTIPFIAR DRKHA
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