Gene Mchl_0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0477 
Symbol 
ID7114633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp468787 
End bp471147 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content70% 
IMG OID643523277 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002419341 
Protein GI218528525 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGGG CGGTGTCCGC GTCCCTGTCC GCGCGCGCAC GCGCGGACAC GATCCTCGGG 
ATCCAACGTA CGACCGGCAC TGCCCAGGCC CGCCTCATCC GGGCGGAGAC GTGGCTTCGC
TACGCGCTTC CGGCTCTGCT CGTCGTCTTC ATGCTCACGC TGCTGGGCGT GGCGGCCCTG
CAGATGCGCG GGCGCCACGA CGAGGCGATG CGCGTGGCCA CCCGCGAGGT GGAGGCCTTC
GCGCGTCTCT CCGCCCTCGC CCTGTCGAAC GCGTCGTTTG CCGCCGAGAC GCGGCTCGAG
CGCGTGCTGC CGGTCCATCT CCTGCCGGCC GGCCGGGAGG TTCTGGTGAT CGGCCCCGGC
GGCCGGATTC GCGCCGCCTA TCCCGCGCCC GCCCCGGCCG AAACCTTCGC CGGCTATCTC
GCCGACGGTG AGCCCATCGC CATCCTCGGC GAGAGCGCCG GGGCGATGAC GGTGAACCTT
CAGGCCGGCG GTCAGGCGGT CGTTGCGGCA CGCCGCCTGG CCGACGGGAT GGGCGAAGTC
GCGGTCGTCC AGAGGTTCGA GCCGCTGGCC GACAATTGGT GGCGGATGTT CGGCCACCAC
GCGGTCTCCC TCTCGGCCAT CGCCCTGGTG CTGGCGGGCA TGGCCACCGC CTACATCCTG
CAGACGCAGC GGGCGCAGGC GGCGGACGAA GTCTGCGATC TCGTCAAGCA GCGCCTCGAC
ACGGCGCTCG GCCGCGGCCG CTGCGGCCTC TGGGATTGGG ACATCGCCCG CGGAACGATC
TTCTGGTCGG ACTCGATGTA CGCCCTGCTC GGCTACACGC CGGAAAAGGA TCTTCTCTCC
TTCGGCGACG TGAACGCGCT GCTGCACGCC GAGGACGGCG ACCTCTACAG CCTCGCCCGC
CACCTCGCCG CGAGCCACGC GACCGTCGAT CACGAGTTCC GCATCCGCGA CGCGTCCGGC
GAGTGGATCT GGCTGCGCAC CCGCGCCGAA ATCGTCGAGG ATGCGGTCGA CGGCAGCCGC
CATCTCGTCG GCATCGCCAT GGACGTGACC GAGCAACGCC GCCTCGCCGA GTTCACCGCC
ACCGCCGACA TGCGCCTGCG CGACGCGGTG GAGGCGGTCT CCGAAGCCTT CGTGCTGTGG
GACGCCAGCA ACCGGCTGGT GCTGTGCAAC TCGAAATTCC GCGACCTGCA CGCCCTGGCC
AGCGAGGATG CGGTGCCCGG CCGCCGCTAC GACGAGATCA TGGGACGGGG CGCCCTCCCC
CCCGTGCGCC GGGGCATTCC GGGTTCGGAA CGCGGCCCGT CGCGGACCTT CGAGGTGGAA
CTGACGGACG GACGCTGGCT CCAGGTCAGC GAGCGGCGGA CCAAGGACGG CGGTTACGTT
TCGGTCGGCA CCGACATCAC CAGCCTCAAG CGCCACCAGG AGCAGCTGGT CACGTCGGAA
CGCGAGCTGA TCGAGACGGT CAAGGATCTC AAGCGGTCCC GTCGCACCCT GGAAACCCAG
ACGCAGCAGC TCGCCGACCT CGCCGAGCGT CATCTCGATC AGAAGGCCCG CGCCGAGATC
GCCAATCAGG CCAAGTCCGA ATTCCTGGCC AATATGAGCC ACGAGCTGCG CACGCCGCTC
AACGCGATCA TGGGCTTTGC CGAGCTGATG GAGAGCGAGG TCTACGGATC GCTCGGCTCG
CCCCGCTACG CCGATTATTG CCGCGACATC CAGCAGAGCG GCACCTACCT GCTCTCGGTC
ATCGACGACA TCCTTCACAT GTCGCGCATC GAGGCGAAGC GGGTGAAGCT CGTACGCCGC
GACATCGACC TCGGCACGGC CCTGACCGCC GCGTTGACGC TGGTGGCCAA GGAGGCGGCG
AGCAAGTCCG TCTCCATCGA TCTCGAACTG GCCGGCACCC TGCATGTGCT GGCCGACGAG
CGGGCGCTCC AGCAGATCCT GCTCAACATC ATCCAGAACG CGGTGAAGTT CACCCCGGAG
CGGGGCCGCG TCGCCCTGCG CGGCCGCTCC TGCAACGGTT TCGTCCACCT GTTCATCGGC
GATACCGGCA TCGGCATCCC GAAGACGGCG ATCTCCAAGC TCGGCCGGCC GTTCGAGCAG
GTCGAGACCA ACCTGACCCG CAGCTACAAG GGCTCCGGCC TCGGCCTCGC CATCGCCCGC
TCCACCGCGG AGCTGCACGG CGGGTCGCTG CGCATCCGCT CCGAGGAAGG GATCGGCACC
CTGGTGCTGG TGCGCCTGCC GATGCCGACG CCCGAGCGCC TCGCCGAGGT CGCACGGGAG
GCCGAGCGCG ACACGCTCAA AGCAATCGGC GACATGCCCG GCGCGGCCCG GACCGAAGGC
GACAGAATCG CGGCCCACTG A
 
Protein sequence
MSGAVSASLS ARARADTILG IQRTTGTAQA RLIRAETWLR YALPALLVVF MLTLLGVAAL 
QMRGRHDEAM RVATREVEAF ARLSALALSN ASFAAETRLE RVLPVHLLPA GREVLVIGPG
GRIRAAYPAP APAETFAGYL ADGEPIAILG ESAGAMTVNL QAGGQAVVAA RRLADGMGEV
AVVQRFEPLA DNWWRMFGHH AVSLSAIALV LAGMATAYIL QTQRAQAADE VCDLVKQRLD
TALGRGRCGL WDWDIARGTI FWSDSMYALL GYTPEKDLLS FGDVNALLHA EDGDLYSLAR
HLAASHATVD HEFRIRDASG EWIWLRTRAE IVEDAVDGSR HLVGIAMDVT EQRRLAEFTA
TADMRLRDAV EAVSEAFVLW DASNRLVLCN SKFRDLHALA SEDAVPGRRY DEIMGRGALP
PVRRGIPGSE RGPSRTFEVE LTDGRWLQVS ERRTKDGGYV SVGTDITSLK RHQEQLVTSE
RELIETVKDL KRSRRTLETQ TQQLADLAER HLDQKARAEI ANQAKSEFLA NMSHELRTPL
NAIMGFAELM ESEVYGSLGS PRYADYCRDI QQSGTYLLSV IDDILHMSRI EAKRVKLVRR
DIDLGTALTA ALTLVAKEAA SKSVSIDLEL AGTLHVLADE RALQQILLNI IQNAVKFTPE
RGRVALRGRS CNGFVHLFIG DTGIGIPKTA ISKLGRPFEQ VETNLTRSYK GSGLGLAIAR
STAELHGGSL RIRSEEGIGT LVLVRLPMPT PERLAEVARE AERDTLKAIG DMPGAARTEG
DRIAAH